RNA–Protein interactions for RNA: ENSMUST00000105579.7

Sdf4-204, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 1,670 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-204ENSMUST00000105579 Col11a1Q61245 1804 aa21.46■■□□□ 1.03
Sdf4-204ENSMUST00000105579 Gm20425E9Q035 978 aaKnown RBP21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 SrprbP47758 269 aa21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 OsbpQ3B7Z2 805 aa21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Kif1bpQ6ZPU9 617 aa21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Rtn1Q8K0T0 780 aa21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Gmcl1Q920G9 524 aa21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Mettl16Q9CQG2 553 aaKnown RBP21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Usp14Q9JMA1 493 aaKnown RBP21.45■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Eef2kO08796 724 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Atoh1P48985 351 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Cplx2P84086 134 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Pxylp1Q8BHA9 480 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Triml1Q8BVP1 470 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Kiaa1524Q8BWY9 907 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Rbm19Q8R3C6 952 aaKnown RBP21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Ubac1Q8VDI7 409 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Myh7bA2AQP0 1941 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Foxp1P58462 705 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Tfcp2l1Q3UNW5 479 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Ttbk2Q3UVR3 1243 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Tbc1d5Q80XQ2 815 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Trnp1Q80ZI1 223 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Plcd3Q8K2J0 785 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Bst2Q8R2Q8 172 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Tfap4Q9JIZ5 338 aa21.44■■□□□ 1.02
Sdf4-204ENSMUST00000105579 A0A1Y7VML8 143 aa21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Pus7B7ZNL8 666 aaKnown RBP21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 GnaqP21279 359 aa21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Sp4Q62445 782 aa21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Bri3bpQ8BXV2 253 aa21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Usp33Q8R5K2 909 aa21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Pdcd6ipQ9WU78 869 aaKnown RBP21.43■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Myh8P13542 1937 aa21.42■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Limch1Q3UH68 1057 aa21.42■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Smc3Q9CW03 1217 aaKnown RBP21.42■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Dicer1Q8R418 1916 aa21.42■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Armc3A2AU72 881 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Nfil3O08750 462 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Ppef2O35385 757 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Babam1Q3UI43 333 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Armc2Q3URY6 854 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Cdkl5Q3UTQ8 938 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Nsrp1Q5NCR9 542 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Ranbp6Q8BIV3 1105 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Ipo9Q91YE6 1041 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Cep89Q9CZX2 791 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Wdr19Q3UGF1 1341 aa21.41■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Catsper2A2ARP9 588 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Smarcc2Q6PDG5 1213 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Dync1li2Q6PDL0 492 aaKnown RBP21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Lrrc15Q80X72 579 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Lrrc24Q8BHA1 521 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Epha10Q8BYG9 1007 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Lzts2Q91YU6 671 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Myo19Q5SV80 963 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Stxbp3Q60770 592 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Syne4Q8CII8 388 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Srgap1Q91Z69 1062 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Gpaa1Q9WTK3 621 aa21.4■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Brca1P48754 1812 aa21.39■■□□□ 1.02
Sdf4-204ENSMUST00000105579 Casq1O09165 405 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 FlgP11088 336 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Traf5P70191 558 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Lilrb3P97484 841 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Spryd7Q3TFQ1 196 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Grm4Q68EF4 912 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Clca4aQ6Q473 924 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 CerkQ8K4Q7 531 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Lrrc2Q8VDB8 371 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Vta1Q9CR26 309 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Inpp4aQ9EPW0 939 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Ccdc88aQ5SNZ0 1873 aa21.39■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Usp17ldG5E8G2 545 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Usp17lcG5E8I7 545 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Mx1P09922 631 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 VegfbP49766 207 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Ccdc84Q4VA36 332 aaKnown RBP21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 U2af1l4Q8BGJ9 220 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Vgll2Q8BGW8 322 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Plcg2Q8CIH5 1265 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Gtf3c5Q8R2T8 520 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 BaatQ91X34 420 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Fsip1Q9D3V5 435 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 ArcQ9WV31 396 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Btbd19S4R1I0 287 aa21.38■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Zmynd8A2A484 1235 aaKnown RBP21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Rexo5D3YW29 759 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Rgs9O54828 675 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 LdhbP16125 334 aaKnown RBP21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Tph1P17532 447 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 OatP29758 439 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Traf1P39428 409 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Pls1Q3V0K9 630 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Slitrk3Q810B9 980 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Fbxo28Q8BIG4 368 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Tcp11l1Q8BTG3 509 aa21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Pspc1Q8R326 523 aaKnown RBP21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Eif4enif1Q9EST3 983 aaKnown RBP21.37■■□□□ 1.01
Sdf4-204ENSMUST00000105579 Zscan20B2KFW1 1030 aa21.37■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms