RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Etv3Q8R4Z4 513 aa13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 HibadhQ99L13 335 aaKnown RBP13.15□□□□□ -0.3
Ccdc60-202ENSMUST00000086483 Gon4lQ9DB00 2260 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ccl5P30882 91 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sept2P42208 361 aaKnown RBP13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Lman2lP59481 347 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Maco1Q7TQE6 664 aaKnown RBP13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Iws1Q8C1D8 766 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Vmn1r203Q8R273 311 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Dock2Q8C3J5 1828 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Krt24A1L317 512 aa13.14□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tex2Q6ZPJ0 1128 aaKnown RBP13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Phtf2Q8CB19 747 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sppl3Q9CUS9 384 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 SmapQ9R0P4 181 aaKnown RBP13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Triml2E9PW10 424 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 GlrbP48168 496 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Siglec10Q80ZE3 688 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Lrrc56Q8K375 552 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Cep72Q9D3R3 646 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sapcd2Q9D818 391 aa13.13□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Flot1O08917 428 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Hmgcs2P54869 508 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 VrtnQ3SYK4 740 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Carmil2Q3V3V9 1296 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ece1Q4PZA2 769 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ppm1gQ61074 542 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Slc26a8Q8R0C3 999 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tomm70Q9CZW5 611 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Alg13Q9D8C3 1166 aaKnown RBP13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ppp2r3dQ9Z176 491 aa13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tcof1O08784 1320 aaKnown RBP13.12□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 EnamO55196 1274 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Defa-rs10Q64263 91 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Znf280dQ68FE8 974 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ift74Q8BKE9 600 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 SerhlQ9EPB5 311 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Guca2bO09051 106 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Slc4a3P16283 1227 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Muc1Q02496 630 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sp4Q62445 782 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Taok2Q6ZQ29 1240 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Pramel7Q810Y8 479 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Dppa3Q8QZY3 150 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ttc8Q8VD72 515 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Pus10Q9D3U0 527 aa13.11□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Aldh1a1P24549 501 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Dis3Q9CSH3 958 aaKnown RBP13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 IcoslgQ9JHJ8 322 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ltbp2O08999 1813 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Skap1Q3UUV5 355 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Pls1Q3V0K9 630 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Zcchc14Q8VIG0 956 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 BaatQ91X34 420 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tomm22Q9CPQ3 142 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Rdm1Q9CQK3 281 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ttyh1Q9D3A9 450 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sept12Q9D451 317 aa13.1□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 A0A1W2P6Q8 802 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Gm9048A0A1W2P7H4 802 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 A0A1W2P7Z8 802 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Gm9046A0A1W2P855 802 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Ppp1r9aH3BJD6 1292 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Nr5a1P33242 462 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Cnksr3Q8BMA3 555 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Senp7Q8BUH8 1037 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Defb19Q8K3I8 83 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tmem39aQ9CYC3 486 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Prkab1Q9R078 270 aa13.09□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Traf1P39428 409 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tff2Q03404 129 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 ZyxQ62523 564 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Skiv2lQ6NZR5 1244 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Sf3a1Q8K4Z5 791 aaKnown RBP13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Eid1Q9DCR4 169 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tle2Q9WVB2 767 aa13.08□□□□□ -0.31
Ccdc60-202ENSMUST00000086483 Tbc1d4Q8BYJ6 1307 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Myo15bI7HPW8 3033 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Gm44511A0A0N4SW10 223 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Nfx1B1AY10 1114 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ankrd35E9Q9D8 996 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 R3hdm1E9Q9Q2 1135 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Mmp8O70138 465 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Cd72P21855 354 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Klrb1bP27812 223 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Stat3P42227 770 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Rnpc3Q3UZ01 514 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 NfrkbQ6PIJ4 1296 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 DnerQ8JZM4 737 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Pcdhgc5Q91XW9 944 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Ier5lQ99J55 406 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Tmx2Q9D710 295 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Chmp4bQ9D8B3 224 aaKnown RBP13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Klrc1Q9Z202 244 aa13.08□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Prss40A6H6T1 365 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Pgk2P09041 417 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Nol8Q3UHX0 1147 aaKnown RBP13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Tshz1Q5DTH5 1084 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Znf687Q9D2D7 1237 aa13.07□□□□□ -0.32
Ccdc60-202ENSMUST00000086483 Sept3Q9Z1S5 350 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms