RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Serpinb3dQ6UKZ0 387 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 ScocQ78YZ6 125 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cdc23Q8BGZ4 597 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Krt5Q922U2 580 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Acsl3Q9CZW4 720 aaKnown RBP11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Krt72Q6IME9 520 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Crnkl1P63154 690 aaKnown RBP11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Snx25Q3ZT31 840 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Hdac4Q6NZM9 1076 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 MgarpQ8VI64 283 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Palm3A2TJV2 734 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ddit3P35639 168 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pnma5Q5DTT8 618 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Flot2Q60634 428 aaKnown RBP11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ankfy1Q810B6 1169 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Trim60Q8VI40 466 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tpd52l2Q9CYZ2 220 aaKnown RBP11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Nup58Q8R332 587 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 RestQ8VIG1 1082 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Col4a3bpQ9EQG9 624 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Zmym3Q9JLM4 1370 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ess2O70279 479 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ankrd26Q811D2 1581 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cnbd1B1AWM0 430 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc84Q4VA36 332 aaKnown RBP11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Lyve1Q8BHC0 318 aa11.37□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Fam170aQ66LM6 333 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Slc4a7Q8BTY2 1034 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Taf11Q99JX1 211 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gins4Q99LZ3 223 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Enc1O35709 589 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Lsg1Q3UM18 644 aaKnown RBP11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Znf697Q569E7 569 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Acnat2Q8BGG9 420 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rabgef1Q9JM13 491 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Naip2Q9QUK4 1447 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm6121L7MUF1 212 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tbc1d23Q8K0F1 684 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Echdc1Q9D9V3 322 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 NemfQ8CCP0 1064 aaKnown RBP11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Angptl2Q9R045 493 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 CopeO89079 308 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Prim1P20664 417 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ect2Q07139 913 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rab3ipQ68EF0 428 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ttc27Q8CD92 847 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cabp5Q9JLK3 173 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Polr3aB2RXC6 1390 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Hif1aQ61221 836 aaKnown RBP11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 NelfbQ8C4Y3 580 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tbx22Q8K402 517 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Myd88P22366 296 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Aplp1Q03157 653 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Efcab2Q9CQ46 164 aa11.36□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc24E9PUW8 296 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Adcy8P97490 1249 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Nek11Q8C0Q4 628 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Psma7Q9Z2U0 248 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ppp4r3aQ6P2K6 820 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tut1Q8R3F9 869 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rasgrf2P70392 1189 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 OtulinQ3UCV8 352 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ncaph2Q8BSP2 607 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 LmnaP48678 665 aaKnown RBP11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc138Q0VF22 680 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Zc3h6Q8BYK8 1177 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cyth2P63034 400 aaKnown RBP11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ppp1r14bQ62084 147 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Krt74Q6IFZ9 495 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Acsbg1Q99PU5 721 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 PudpQ9D5U5 234 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pde3aQ9Z0X4 1141 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Deaf1Q9Z1T5 566 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm28360A0A087WR25 190 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Arhgap17Q3UIA2 846 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ccdc125Q5U465 500 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Cyp7a1Q64505 503 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Kif1bpQ6ZPU9 617 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Champ1Q8K327 802 aaKnown RBP11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gid8Q9D7M1 228 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gnat2P50149 354 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 MycbpapQ5SUV2 932 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Fam50bQ9WTJ8 334 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tlk2O55047 718 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Znf76Q8BMU0 568 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Ifih1Q8R5F7 1025 aa11.35□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Gm45015A0A140LII9 184 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Phldb3E9QAF4 648 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Slc4a4O88343 1079 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tdrd7Q8K1H1 1086 aaKnown RBP11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Sh2d4aQ9D7V1 421 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 ParvgQ9ERD8 331 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 1700006A11RikB9EHI3 544 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Tcp1P11983 556 aaKnown RBP11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Pwp2Q8BU03 919 aaKnown RBP11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Klhl31Q8BWA5 634 aa11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Rprd2Q6NXI6 1469 aaKnown RBP11.34□□□□□ -0.59
Col6a3-201ENSMUST00000056925 Atf2P16951 487 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms