RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Tdrd1Q99MV1 1172 aa21.61■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Tmem47Q9JJG6 181 aa21.61■■□□□ 1.05
Vti1b-201ENSMUST00000055262 DaxxO35613 739 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Alppl2P24823 529 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Dnajc2P54103 621 aaKnown RBP21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Hspa8P63017 646 aaKnown RBP21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Fndc3c1Q6DFV6 1356 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Tnpo1Q8BFY9 898 aaKnown RBP21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 VmacQ8BP01 174 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Vta1Q9CR26 309 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Rufy3Q9D394 469 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Pdcd6ipQ9WU78 869 aaKnown RBP21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Suclg2Q9Z2I8 433 aa21.6■■□□□ 1.05
Vti1b-201ENSMUST00000055262 A430078G23RikE9Q7Y4 484 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Stx8O88983 236 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Cyp2b10P12791 500 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 CenpbP27790 599 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Sp4Q62445 782 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Adgrg6Q6F3F9 1165 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Itm2cQ91VK4 269 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Mad2l2Q9D752 211 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Usp34Q6ZQ93 3582 aa21.59■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Sptbn5F6UCX4 1208 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 B020004C17RikJ3QP07 232 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Myl3P09542 204 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Traf3ip1Q149C2 625 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Slc16a10Q3U9N9 512 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Tmtc2Q56A06 836 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Usp50Q6P8X6 390 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Tmem59lQ7TNI2 337 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Slc45a1Q8BIV7 751 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 H2-Q4Q8HWB2 354 aa21.58■■□□□ 1.05
Vti1b-201ENSMUST00000055262 Rexo5D3YW29 759 aa21.58■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Ppp1r10Q80W00 888 aaKnown RBP21.58■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Defb15Q8R2I5 79 aa21.58■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Cnpy3Q9DAU1 276 aa21.58■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Q3UK37 420 aa21.57■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Swap70Q6A028 585 aaKnown RBP21.57■■□□□ 1.04
Vti1b-201ENSMUST00000055262 DymQ8CHY3 669 aa21.57■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Dppa3Q8QZY3 150 aa21.57■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Kdm4cQ8VCD7 1054 aa21.57■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Myh7bA2AQP0 1941 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Vmn2r23E9PXI5 849 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Me1P06801 572 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Calm1P0DP26 149 aaKnown RBP21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Calm2P0DP27 149 aaKnown RBP21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Calm3P0DP28 149 aaKnown RBP21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 SelpQ01102 768 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Tshz1Q5DTH5 1084 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Srgap1Q91Z69 1062 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Rcan1Q9JHG6 198 aa21.56■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Disp2Q8CIP5 1345 aa21.55■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Cyp26a1O55127 497 aa21.55■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Gtf3c5Q8R2T8 520 aa21.55■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Elp3Q9CZX0 547 aa21.55■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Ppp2r5bQ6PD28 497 aa21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Ppp1r9bQ6R891 817 aaKnown RBP21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Riox2Q8CD15 465 aa21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Pof1bQ8K4L4 587 aa21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Gimap7Q8R379 293 aa21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Traf7Q922B6 594 aa21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Mettl16Q9CQG2 553 aaKnown RBP21.54■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Myh8P13542 1937 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Vwa3bJ9JI28 736 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Stat1P42225 749 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Sfi1Q3UZY0 1216 aaKnown RBP21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Ckap2Q3V1H1 664 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Podnl1Q6P3Y9 559 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Filip1lQ6P6L0 1131 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Lca5Q80ST9 704 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Tpcn2Q8BWC0 731 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Bola3Q8CEI1 110 aa21.53■■□□□ 1.04
Vti1b-201ENSMUST00000055262 LdhaP06151 332 aaKnown RBP21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Syt1P46096 421 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Atp6v1dP57746 247 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Cep63Q3UPP8 700 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Plcd3Q8K2J0 785 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Rufy2Q8R4C2 606 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Lonrf3Q9D4H7 753 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Chmp4cQ9D7F7 232 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Dock2Q8C3J5 1828 aa21.52■■□□□ 1.04
Vti1b-201ENSMUST00000055262 Ces1hD3Z298 562 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Metap2O08663 478 aaKnown RBP21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Copb2O55029 905 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Irf5P56477 497 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Specc1Q5SXY1 1067 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Fsd1Q7TPM6 496 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Kiaa1524Q8BWY9 907 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Gmcl1Q920G9 524 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 HlcsQ920N2 722 aa21.52■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Naaladl2A0A0N4SUJ3 795 aa21.51■■□□□ 1.03
Vti1b-201ENSMUST00000055262 ArxO35085 564 aa21.51■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Haus6Q6NV99 933 aaKnown RBP21.51■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Ms4a5Q810P8 197 aa21.51■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Sapcd2Q9D818 391 aa21.51■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Flot1O08917 428 aa21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Sap30bpQ02614 308 aa21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Pls1Q3V0K9 630 aa21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 Fndc3bQ6NWW9 1207 aaKnown RBP21.5■■□□□ 1.03
Vti1b-201ENSMUST00000055262 BaatQ91X34 420 aa21.5■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms