RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Cdc37Q61081 379 aa12.78□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Tm4sf1Q64302 202 aa12.78□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Letm1Q9Z2I0 738 aa12.78□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Tsc2Q61037 1814 aa12.78□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Lcmt1A0A0U1RNF2 332 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Prss51A0A286YDY8 319 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Gm3893E9Q1I1 302 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Casp12O08736 419 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Cplx2P84086 134 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Washc4Q3UMB9 1173 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Ireb2Q811J3 963 aaKnown RBP12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Xpo4Q9ESJ0 1151 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Tmod2Q9JKK7 351 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Atrnl1Q6A051 1378 aa12.77□□□□□ -0.36
Ckap2-201ENSMUST00000046916 Ankrd13cQ3UX43 541 aa12.77□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc51aQ8R000 340 aa12.77□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Nova2D3YVV7 556 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Nkx1-1G3UXB3 402 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 PnnO35691 725 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Myo1aO88329 1043 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Serpinb2P12388 415 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 FosbP13346 338 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Eif5P59325 429 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Vps37dQ810I0 261 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Prkag3Q8BGM7 489 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 CrebrfQ8CDG5 640 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Pramel3A2AHA7 463 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Gm7903A2AWL1 463 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 AV320801A2AWL3 467 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Btn2a2A4QPC6 514 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ldlrad1D3YYZ1 218 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Gm15023L7MUB4 467 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 CnpP16330 420 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Stat5bP42232 786 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Hspa8P63017 646 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Pfkfb1P70266 471 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc10a4Q3UEZ8 437 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ckap2Q3V1H1 664 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 L1td1Q587J6 782 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ltv1Q6NSQ7 470 aaKnown RBP12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Sept9Q80UG5 583 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc4a7Q8BTY2 1034 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Evc2Q8K1G2 1220 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Arih1Q9Z1K5 555 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Fndc3c1Q6DFV6 1356 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Serpinb6bO08804 377 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 HunkO88866 714 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Foxp1P58462 705 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ppp1r21Q3TDD9 780 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Trmt1Q3TX08 663 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Nlrp9aQ66X03 949 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Krt40Q6IFX3 439 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Adam39Q7M762 756 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Cnot6lQ8VEG6 555 aa12.76□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Pnpla6Q3TRM4 1355 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Large2Q5XPT3 690 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc45a1Q8BIV7 751 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Phf20l1Q8CCJ9 1013 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Elf2Q9JHC9 593 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Znf568E9PYI1 671 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Pcdhb9E9Q5G2 828 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Metap2O08663 478 aaKnown RBP12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 L1camP11627 1260 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Paxbp1P58501 919 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Rbm15bQ6PHZ5 887 aaKnown RBP12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Paf1Q8K2T8 535 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Wasf1Q8R5H6 559 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 ParnQ8VDG3 624 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Krt84Q99M73 603 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 RarsQ9D0I9 660 aaKnown RBP12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Borcs6Q9D6W8 360 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Zbtb43Q9DAI4 467 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 AatfQ9JKX4 526 aaKnown RBP12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 S1pr4Q9Z0L1 386 aa12.75□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Grin2dQ03391 1323 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ampd3O08739 766 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Spata21Q8BHW6 681 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Rec8Q8C5S7 591 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Bola3Q8CEI1 110 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Sulf1Q8K007 870 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Hps3Q91VB4 1002 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Tmem79Q9D709 391 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Acot9Q9R0X4 439 aaKnown RBP12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc27a3O88561 667 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ppfia3P60469 1194 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Hand2Q61039 217 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Edrf1Q6GQV7 1239 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Slc44a1Q6X893 653 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Rassf10Q8BL43 508 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Znf428Q8C1M2 176 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Syt5Q9R0N5 386 aa12.74□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ktn1Q61595 1327 aaKnown RBP12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Adgra2Q91ZV8 1336 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Cyp26a1O55127 497 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Samsn1P57725 372 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Spryd7Q3TFQ1 196 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Kmt5bQ3U8K7 883 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Pcdhb14Q6PB90 796 aa12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Ddx55Q6ZPL9 600 aaKnown RBP12.73□□□□□ -0.37
Ckap2-201ENSMUST00000046916 Tcp11l1Q8BTG3 509 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms