RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Fam205a1D3YZF6 1314 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Akap2O54931 893 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 D630036H23RikQ3UQD6 204 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Tbc1d31Q6NXY1 996 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 R3hcc1Q8BSI6 488 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Sec62Q8BU14 398 aaKnown RBP26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Naa30Q8CES0 364 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Trex1Q91XB0 314 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Styxl1Q9DAR2 321 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Tfap4Q9JIZ5 338 aa26.32■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Ccng2O08918 344 aa26.31■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Mmp14P53690 582 aa26.31■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Nsrp1Q5NCR9 542 aa26.3■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Prkag3Q8BGM7 489 aa26.3■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Chd1lQ9CXF7 900 aa26.3■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Tnip1Q9WUU8 647 aa26.3■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Megf6Q80V70 1572 aa26.3■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Cyp3a25O09158 503 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Copb2O55029 905 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Tmprss11eQ5S248 423 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Casc1Q6TDU8 730 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Med4Q9CQA5 270 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Zbtb22Q9Z0G7 638 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Ube2hP62257 183 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Cplx1P63040 134 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Irf6P97431 467 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Sap30bpQ02614 308 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Fam89aQ14BJ1 175 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Exoc8Q6PGF7 716 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Lca5Q80ST9 704 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Ccdc178Q8CDV0 866 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Ndufb9Q9CQJ8 179 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Igbp1bQ9QZ29 343 aa26.29■■□□□ 1.8
Upf3a-201ENSMUST00000043767 NcapgE9PWG6 1004 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Mboat4P0C7A3 435 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 GnaqP21279 359 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Lilrb3P97484 841 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Gpr162Q3UN16 588 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Stxbp2Q64324 593 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Haus6Q6NV99 933 aaKnown RBP26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 AllcQ9JHX6 414 aa26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 SmapQ9R0P4 181 aaKnown RBP26.28■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Pfkfb3A7UAK5 555 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 LdhaP06151 332 aaKnown RBP26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Kctd1Q5M956 257 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Dnaaf2Q8BPI1 814 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Olfml1Q8BSH2 233 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 GrapQ9CX99 217 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Acot3Q9QYR7 432 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 SisF8VQM5 1818 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 CtshP49935 333 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Eif5P59325 429 aaKnown RBP26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 NogP97466 232 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Ttbk2Q3UVR3 1243 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Usp28Q5I043 1051 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Eid1Q9DCR4 169 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Stk32bQ9JJX8 414 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 Krt85Q9Z2T6 507 aa26.27■■□□□ 1.8
Upf3a-201ENSMUST00000043767 U2af2P26369 475 aaKnown RBP26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Mars2Q499X9 586 aaKnown RBP26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Grm4Q68EF4 912 aa26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Scfd1Q8BRF7 639 aaKnown RBP26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Rbm10Q99KG3 930 aaKnown RBP26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Prkab1Q9R078 270 aa26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Homer1Q9Z2Y3 366 aa26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 LeprP48356 1162 aa26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Slc9c1Q6UJY2 1175 aa26.26■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Klhl34A2AI76 644 aa26.25■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Sema3eP70275 775 aa26.25■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Epha2Q03145 977 aa26.25■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Clic4Q9QYB1 253 aa26.25■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Kcna1P16388 495 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Q3UJP5 209 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Prr7Q3V0I2 269 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Gm11437Q5QR91 290 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Krt74Q6IFZ9 495 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Senp6Q6P7W0 1132 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Evc2Q8K1G2 1220 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Cd2apQ9JLQ0 637 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Bace1P56818 501 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Kmt5bQ3U8K7 883 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Arhgef2Q60875 985 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Clca4aQ6Q473 924 aa26.24■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Phf20l1Q8CCJ9 1013 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Snapc2Q91XA5 359 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Lzts2Q91YU6 671 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Psmd10Q9Z2X2 231 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Bach2P97303 839 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Zfp51Q3U4L8 781 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Cyp4x1Q6A152 507 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Ndufa8Q9DCJ5 172 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Dpp7Q9ET22 506 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Ubxn8Q9QZ49 277 aa26.23■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Cacna1fQ9JIS7 1985 aa26.22■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Vps37dQ810I0 261 aa26.22■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Mtmr3Q8K296 1196 aa26.22■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Gpsm2Q8VDU0 679 aa26.22■■□□□ 1.79
Upf3a-201ENSMUST00000043767 EzrP26040 586 aaKnown RBP26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Hvcn1Q3U2S8 269 aa26.21■■□□□ 1.79
Upf3a-201ENSMUST00000043767 Zscan22Q8BGS5 496 aa26.21■■□□□ 1.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms