RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 CatspereP0DP43 985 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Chp1P61022 195 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Shox2P70390 331 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Acsbg2Q2XU92 667 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Olfr121Q5CZY0 321 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ddx3yQ62095 658 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Clec16aQ80U30 1036 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Champ1Q8K327 802 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Stap2Q8R0L1 411 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Taf6lQ8R2K4 616 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 PtpruB1AUH1 1446 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 NalcnQ8BXR5 1738 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Akr1b10G5E895 316 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Eftud2O08810 971 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Traf5P70191 558 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Hdgfl1Q2VPR5 283 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Gbp9Q8BTS3 619 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Sugp1Q8CH02 643 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Caap1Q8VDY9 356 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Smc6Q924W5 1097 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Eps8l2Q99K30 729 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Echdc1Q9D9V3 322 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Slc40a1Q9JHI9 570 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Gli2Q0VGT2 1544 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cul4bA2A432 970 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ube3aO08759 870 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Sdc2P43407 202 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Adck2Q6NSR3 617 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ift122Q6NWV3 1182 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Fbxo38Q8BMI0 1194 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Q8C6G1 249 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Mfap3Q922T2 349 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Nsmce1Q9D720 266 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Rbbp8nlA2ABX0 614 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Trappc3O55013 180 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Lmnb2P21619 596 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ets1P27577 440 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 SsbP32067 415 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Vps37dQ810I0 261 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Map10Q8BJS7 891 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ddx47Q9CWX9 455 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Tktl2Q9D4D4 627 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cfap45Q9D9U9 551 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Lrrc34Q9DAM1 415 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 ThegQ9JMB1 375 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 BcorQ8CGN4 1759 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Scgb2b11A0A087WR49 112 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Acad12D3Z7X0 555 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Taf4bG5E8Z2 855 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 CtcfQ61164 736 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 PapolaQ61183 739 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Git1Q68FF6 770 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 F13a1Q8BH61 732 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Vwa5aQ99KC8 793 aaKnown RBP11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Haus2Q9CQS9 234 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cacna2d3Q9Z1L5 1091 aa11.19□□□□□ -0.62
Copb1-201ENSMUST00000033012 Pitpnm2Q6ZPQ6 1335 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Vmn2r23E9PXI5 849 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Speer4aF8VPX6 267 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Clcn6O35454 870 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Map3k13Q1HKZ5 959 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 VeztQ3ZK22 780 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ccdc42Q5SV66 316 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Klhl23Q6GQU2 558 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 FsbpQ8BKE5 299 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Pde5aQ8CG03 865 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Spata4Q8K3V1 295 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Slc12a6Q924N4 1150 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Arfgap2Q99K28 520 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 4930449I24RikQ9D5E3 319 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 LrmdaQ9D9B4 229 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Nckap5lQ6GQX2 1323 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Kif5cP28738 956 aaKnown RBP11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ezh1P70351 747 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Smarcad1Q04692 1021 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Rhpn1Q61085 643 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 4930504O13RikQ8C5Z9 145 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 HibchQ8QZS1 385 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Nup133Q8R0G9 1155 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Atp1b4Q99ME6 356 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 NenfQ9CQ45 171 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Rsrc1Q9DBU6 334 aa11.18□□□□□ -0.62
Copb1-201ENSMUST00000033012 Gm5580A0A0N4SVP8 411 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cpsf2O35218 782 aaKnown RBP11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Rint1Q8BZ36 792 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Thap2Q9D305 217 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ndst4Q9EQW8 872 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Plagl1Q9JLQ4 704 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Qser1A2BIE1 1698 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Atp10bB1AWN4 1474 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Pdia2D3Z6P0 527 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Tmem59lQ7TNI2 337 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Olfr119Q7TRJ5 321 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Acbd3Q8BMP6 525 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cep55Q8BT07 462 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 CntrobQ8CB62 887 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Spats2lQ91WJ7 558 aaKnown RBP11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Akr1e2Q9DCT1 301 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Serpina1bP22599 413 aa11.17□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cct6aP80317 531 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms