RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Pde11aP0C1Q2 933 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Hoxc10P31257 342 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Sp4Q62445 782 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Nek11Q8C0Q4 628 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Tcof1O08784 1320 aaKnown RBP9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Myh8P13542 1937 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Tmigd3G3X8R9 209 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Slc1a4O35874 532 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Sh3bp1P55194 680 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Q3TYL0 343 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Glra4Q61603 456 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Zbtb39Q6PDK0 712 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Otop3Q80UF9 577 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Prune1Q8BIW1 454 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Mtmr4Q91XS1 1190 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Eaf2Q91ZD6 262 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Alpk1Q9CXB8 1231 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Efcc1Q9JJF6 558 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Tmod4Q9JLH8 345 aa9.42□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Kmt2eQ3UG20 1868 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Phldb3E9QAF4 648 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Slc4a3P16283 1227 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Cyp2c37P56654 490 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Il6stQ00560 917 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Sfi1Q3UZY0 1216 aaKnown RBP9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Cep131Q62036 1060 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Swap70Q6A028 585 aaKnown RBP9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Cyp2c54Q6XVG2 490 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Htatsf1Q8BGC0 757 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Znf784Q8BI69 297 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Lrch3Q8BVU0 778 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Ttll1Q91V51 423 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Fubp1Q91WJ8 651 aaKnown RBP9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Cyp2c50Q91X77 490 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Zscan18E9PUD6 809 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Fscn2Q32M02 492 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Siglec10Q80ZE3 688 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Serpinb13Q8CDC0 389 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Smc5Q8CG46 1101 aaKnown RBP9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Nup133Q8R0G9 1155 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Ctu1Q99J10 420 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 PhaxQ9JJT9 385 aaKnown RBP9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Dnajb2Q9QYI5 324 aa9.41□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Ms4a4aA0A087WRT7 236 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Flot1O08917 428 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Parp2O88554 559 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Ftl1P29391 183 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Atp11aP98197 1187 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Tshz1Q5DTH5 1084 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 BaatQ91X34 420 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 PfkpQ9WUA3 784 aaKnown RBP9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Gml2G5E8L7 176 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Fzd1O70421 642 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 MyocO70624 490 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Cd3dP04235 173 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Filip1lQ6P6L0 1131 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Prpf40bQ80W14 870 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Nim1kQ8BHI9 436 aa9.4□□□□□ -0.9
Ssr3-201ENSMUST00000029414 Ulk4Q3V129 1303 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gm9857F7CXR1 130 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ppp1r9aH3BJD6 1292 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pls1Q3V0K9 630 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gm10392Q3V3I3 114 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Srrm1Q52KI8 946 aaKnown RBP9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Zfp90Q61967 636 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Adgrg6Q6F3F9 1165 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 BcrQ6PAJ1 1270 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Trim32Q8CH72 655 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Usp53P15975 1069 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ptpn12P35831 775 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 GabpaQ00422 454 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 StrbpQ91WM1 672 aaKnown RBP9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 SerhlQ9EPB5 311 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Rabgap1A2AWA9 1064 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Wdr63B2RY71 923 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 A430078G23RikE9Q7Y4 484 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Fam170aQ66LM6 333 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Adgra1Q8C4G9 578 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Shisa4Q8CA71 197 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 E4f1Q8CCE9 783 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Zswim3Q8CFL8 695 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pspc1Q8R326 523 aaKnown RBP9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 DcpsQ9DAR7 338 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Clip2Q9Z0H8 1047 aa9.39□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Ppfia1B2RXQ2 1266 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gm3138K7N754 218 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Gja8P28236 440 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Lig1P37913 916 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Traf1P39428 409 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Crhr2Q60748 411 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tekt3Q6X6Z7 490 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Tacc1Q6Y685 774 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Bclaf1Q8K019 919 aaKnown RBP9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Arhgef6Q8K4I3 771 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Trib2Q8K4K3 343 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Kntc1Q8C3Y4 2207 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Lamb2Q61292 1799 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 LtkP08923 888 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 B230104I21RikQ3USW4 141 aa9.38□□□□□ -0.91
Ssr3-201ENSMUST00000029414 Pip5kl1Q6U7H8 395 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms