RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ttf2Q5NC05 1138 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Naa35Q6PHQ8 725 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Klhl30Q8C3F7 581 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Eva1bQ8K2Y3 164 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ascc1Q9D8Z1 356 aaKnown RBP12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Col4a3bpQ9EQG9 624 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ddx20Q9JJY4 825 aaKnown RBP12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ubr2Q6WKZ8 1755 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Casp8O89110 480 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Pdrg1P59048 133 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ag2Q3UPL5 249 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 AidaQ8C4Q6 305 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Mtmr3Q8K296 1196 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Eif3hQ91WK2 352 aaKnown RBP12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Themis2Q91YX0 663 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Rab27aQ9ERI2 221 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Large1Q9Z1M7 756 aa12.9□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Fbf1A2A870 1173 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Rad23aP54726 363 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Arhgap44Q5SSM3 814 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Rint1Q8BZ36 792 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Mylk2Q8VCR8 613 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Srgap2Q91Z67 1071 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Stxbp4Q9WV89 557 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Orc2Q60862 576 aaKnown RBP12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Ccdc148Q6P5U8 527 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Sp8Q8BMJ8 486 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Rbm41Q8JZV4 413 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Tmed5Q9CXE7 229 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Bcl2l12Q9D3J3 255 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Akap11E9Q777 1895 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Sos2Q02384 1333 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Kcnb2A6H8H5 907 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 CltaO08585 235 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Slc8a1P70414 970 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Cdr2P97817 455 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Fam170aQ66LM6 333 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Asap2Q7SIG6 958 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Bpifb6Q8BU51 449 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Six6os1Q9CTN5 574 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Ybx3Q9JKB3 361 aaKnown RBP12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Kif9Q9WV04 790 aa12.89□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Kcnh4A2A5F7 1018 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Pls1Q3V0K9 630 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 MaeaQ4VC33 396 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Trpc6Q61143 930 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Eif4bQ8BGD9 611 aaKnown RBP12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Pms1Q8K119 917 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Dhx58Q99J87 678 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Bub1bQ9Z1S0 1052 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Mybbp1aQ7TPV4 1344 aaKnown RBP12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Zfp42P22227 288 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Slc12a2P55012 1205 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Usp13Q5BKP2 858 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Krt39Q6IFX4 482 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Wdr44Q6NVE8 915 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Vipas39Q8BGQ1 491 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Tmem266Q8BZB3 538 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Klc3Q91W40 508 aa12.88□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Gm5814J3QP80 125 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Hspd1P63038 573 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 SfswapQ3USH5 945 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Cd37Q61470 281 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Anapc5Q8BTZ4 740 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Leng8Q8CBY3 785 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Dnm1lQ8K1M6 742 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Eps8l2Q99K30 729 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Mrfap1Q9CQL7 125 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 MrgbpQ9DAT2 204 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Hmg20bQ9Z104 317 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Gcom1E9PZ54 550 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Trim34bJ3QNR8 485 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 TsksO54887 585 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Gnat1P20612 350 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Pde4dQ01063 747 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Klrb1Q0ZUP1 214 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 MyzapQ3UIJ9 466 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Fsd1Q7TPM6 496 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Galnt17Q7TT15 598 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Ankrd23Q812A3 306 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Cdca8Q8BHX3 289 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Matr3Q8K310 846 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Lrrc34Q9DAM1 415 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Golgb1E9PVZ8 3238 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Tiam2Q6ZPF3 1715 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Pramel3A2AHA7 463 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Gm7903A2AWL1 463 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 AV320801A2AWL3 467 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Gm15023L7MUB4 467 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Nr1i2O54915 431 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Il27raO70394 623 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Pth1rP41593 591 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Stat1P42225 749 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Top1Q04750 767 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Myo6Q64331 1265 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 CntrobQ8CB62 887 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Trim34aQ99PP6 485 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 PyglQ9ET01 850 aa12.87□□□□□ -0.35
Sdc1-201ENSMUST00000020911 Prr5lA2AVJ5 370 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms