RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ttll4Q80UG8 1193 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gtpbp4Q99ME9 634 aaKnown RBP21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 LpxnQ99N69 386 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 1700018B08RikQ9DA83 213 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Tbc1d2B1AVH7 922 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Zfand4D3Z3C6 739 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Serpina16D3Z660 418 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Map9Q3TRR0 646 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Phldb2Q8K1N2 1249 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gimap7Q8R379 293 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Lonp2Q9DBN5 852 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Adgra3Q7TT36 1310 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 A0A1W2P7S8 802 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 SfswapQ3USH5 945 aaKnown RBP21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Cdc5lQ6A068 802 aaKnown RBP21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 TxlnaQ6PAM1 554 aaKnown RBP21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gimap8Q75N62 688 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Pak1O88643 545 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Mdh1P14152 334 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Cdc23Q8BGZ4 597 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 McamQ8R2Y2 648 aaKnown RBP21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Copb1Q9JIF7 953 aa21.18■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Palm3A2TJV2 734 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Rsph10bE9PYQ0 876 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Psmb7P70195 277 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Drc7Q6V3W6 876 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ccdc88aQ5SNZ0 1873 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gm5134E9QAB5 671 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Tacc1Q6Y685 774 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Fam43aQ8BUP8 424 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Hgh1Q8C3I8 393 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 NelfbQ8C4Y3 580 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Fermt2Q8CIB5 680 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Uap1Q91YN5 522 aa21.17■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ubap1lG3UW59 384 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Scgb2b19J3QM75 112 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Usp50Q6P8X6 390 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Bicdl2Q8CHW5 507 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Tmem60Q8K174 133 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Uso1Q9Z1Z0 959 aaKnown RBP21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Kif23E9Q5G3 953 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 GypcQ78HU7 95 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Q8C5C9 218 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Mtfr1lQ9CWE0 289 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 PdclQ9DBX2 301 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Egfl6Q9JJZ5 550 aa21.16■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Kif3cO35066 796 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ftl1P29391 183 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Arhgef6Q8K4I3 771 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Washc1Q8VDD8 475 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Duox1A2AQ92 1551 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gm36210A0A1B0GS00 229 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gcom1E9PZ54 550 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Stx8O88983 236 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Celf1P28659 486 aaKnown RBP21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 MyzapQ3UIJ9 466 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Mum1l1Q4VA55 681 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Setdb2Q8C267 713 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Rrp1bQ91YK2 724 aaKnown RBP21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Clstn1Q9EPL2 979 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ybx3Q9JKB3 361 aaKnown RBP21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Letm1Q9Z2I0 738 aa21.15■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gm5580A0A0N4SVP8 411 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 A0A1W2P6Q8 802 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm9048A0A1W2P7H4 802 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 A0A1W2P7Z8 802 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm9046A0A1W2P855 802 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 MeiocA2AG06 965 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cdcp1Q5U462 833 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cep131Q62036 1060 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cnga2Q62398 664 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Cnnm4Q69ZF7 771 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Znf526Q8BI66 675 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Pspc1Q8R326 523 aaKnown RBP21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 AllcQ9JHX6 414 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Dpf1Q9QX66 387 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tpp1O89023 562 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Nr5a1P33242 462 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Fam83bQ0VBM2 1012 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 LrmpQ60664 539 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Pm20d1Q8C165 503 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ano2Q8CFW1 1002 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Eps8l1Q8R5F8 716 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Gm11983V9GXS8 105 aa21.14■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 C4bP01029 1738 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Bicdl1A0JNT9 577 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Btn2a2A4QPC6 514 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 MthfslL7N466 203 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Krt86P97861 486 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Rtel1Q0VGM9 1203 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Znhit6Q3UFB2 460 aaKnown RBP21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tubb2aQ7TMM9 445 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Aggf1Q7TN31 711 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Ccp110Q7TSH4 1004 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Adck5Q80V03 582 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Stac3Q8BZ71 360 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Efcab8Q8C9R9 203 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Nup133Q8R0G9 1155 aa21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Smc1aQ9CU62 1233 aaKnown RBP21.13■□□□□ 0.97
Shkbp1-201ENSMUST00000003857 Tubb2bQ9CWF2 445 aa21.13■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 91.5 ms