RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C GPM1P00950 247 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C PUT4P15380 627 aa6.05□□□□□ -1.44
VPS4YPR173C RPC82P32349 654 aa6.05□□□□□ -1.44
VPS4YPR173C SKG6P32900 734 aaPredicted RBP6.05□□□□□ -1.44
VPS4YPR173C DUR3P33413 735 aa6.05□□□□□ -1.44
VPS4YPR173C TGL1P34163 548 aa6.05□□□□□ -1.44
VPS4YPR173C RDH54P38086 958 aa6.05□□□□□ -1.44
VPS4YPR173C YBR259WP38338 688 aa6.05□□□□□ -1.44
VPS4YPR173C PHO89P38361 574 aa6.05□□□□□ -1.44
VPS4YPR173C QNS1P38795 714 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C GGA2P38817 585 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C KEL1P38853 1164 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C RPS26AP39938 119 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C RPS26BP39939 119 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C UBP7P40453 1071 aa6.05□□□□□ -1.44
VPS4YPR173C EMC2P47133 292 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C RFX1P48743 811 aa6.05□□□□□ -1.44
VPS4YPR173C ORC5P50874 479 aa6.05□□□□□ -1.44
VPS4YPR173C YGL039WP53183 348 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C YGR035CP53222 116 aa6.05□□□□□ -1.44
VPS4YPR173C MUB1Q03162 620 aa6.05□□□□□ -1.44
VPS4YPR173C TAF11Q04226 346 aa6.05□□□□□ -1.44
VPS4YPR173C YMR226CQ05016 267 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C SPH1Q06160 661 aa6.05□□□□□ -1.44
VPS4YPR173C ASA1Q06822 443 aa6.05□□□□□ -1.44
VPS4YPR173C AAD15Q08361 143 aa6.05□□□□□ -1.44
VPS4YPR173C DBP10Q12389 995 aaKnown RBP6.05□□□□□ -1.44
VPS4YPR173C PCD1Q12524 340 aa6.05□□□□□ -1.44
VPS4YPR173C RGS2Q99188 309 aa6.05□□□□□ -1.44
VPS4YPR173C MRP10O75012 95 aa6.04□□□□□ -1.44
VPS4YPR173C VMA2P16140 517 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C YCR015CP25616 317 aa6.04□□□□□ -1.44
VPS4YPR173C BUD23P25627 275 aaPredicted RBP6.04□□□□□ -1.44
VPS4YPR173C URA10P30402 227 aa6.04□□□□□ -1.44
VPS4YPR173C SEC1P30619 724 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C PEP7P32609 515 aa6.04□□□□□ -1.44
VPS4YPR173C CYM1P32898 989 aa6.04□□□□□ -1.44
VPS4YPR173C RPT5P33297 434 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C YKL222CP35995 705 aa6.04□□□□□ -1.44
VPS4YPR173C TPO5P36029 618 aa6.04□□□□□ -1.44
VPS4YPR173C SHC1P39000 512 aa6.04□□□□□ -1.44
VPS4YPR173C PCF11P39081 626 aaPredicted RBP6.04□□□□□ -1.44
VPS4YPR173C YIL054WP40524 105 aa6.04□□□□□ -1.44
VPS4YPR173C SCD6P45978 349 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
VPS4YPR173C ASN1P49089 572 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C BIO5P53744 561 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C GPD1Q00055 391 aaKnown RBP6.04□□□□□ -1.44
VPS4YPR173C YMR209CQ03648 457 aa6.04□□□□□ -1.44
VPS4YPR173C TRS130Q03660 1102 aa6.04□□□□□ -1.44
VPS4YPR173C GRX3Q03835 250 aa6.04□□□□□ -1.44
VPS4YPR173C SND1Q04007 877 aa6.04□□□□□ -1.44
VPS4YPR173C SMP3Q04174 516 aa6.04□□□□□ -1.44
VPS4YPR173C YDL114WQ07530 308 aa6.04□□□□□ -1.44
VPS4YPR173C AIM39Q08223 395 aa6.04□□□□□ -1.44
VPS4YPR173C YLL056CQ12177 298 aa6.04□□□□□ -1.44
VPS4YPR173C DED1P06634 604 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C COR1P07256 457 aa6.03□□□□□ -1.44
VPS4YPR173C GCY1P14065 312 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
VPS4YPR173C TSR4P25040 408 aa6.03□□□□□ -1.44
VPS4YPR173C KIN82P25341 720 aa6.03□□□□□ -1.44
VPS4YPR173C HRR25P29295 494 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C RIM1P32445 135 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C PHA2P32452 334 aa6.03□□□□□ -1.44
VPS4YPR173C MRP4P32902 394 aa6.03□□□□□ -1.44
VPS4YPR173C YMC2P38087 329 aa6.03□□□□□ -1.44
VPS4YPR173C RIM11P38615 370 aa6.03□□□□□ -1.44
VPS4YPR173C GOS1P38736 223 aa6.03□□□□□ -1.44
VPS4YPR173C OTU2P38747 307 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C PEX18P38855 283 aa6.03□□□□□ -1.44
VPS4YPR173C SEC31P38968 1273 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C FAA3P39002 694 aa6.03□□□□□ -1.44
VPS4YPR173C HMF1P40037 129 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C GET1P53192 235 aa6.03□□□□□ -1.44
VPS4YPR173C YPR003CP53394 754 aa6.03□□□□□ -1.44
VPS4YPR173C YNL146WP53906 100 aa6.03□□□□□ -1.44
VPS4YPR173C CIK1Q01649 594 aa6.03□□□□□ -1.44
VPS4YPR173C SKI8Q02793 397 aaPredicted RBP6.03□□□□□ -1.44
VPS4YPR173C NAN1Q02931 896 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C PMT7Q06644 662 aa6.03□□□□□ -1.44
VPS4YPR173C PSR1Q07800 427 aa6.03□□□□□ -1.44
VPS4YPR173C ISA1Q07821 250 aaPredicted RBP6.03□□□□□ -1.44
VPS4YPR173C RPN8Q08723 338 aaKnown RBP6.03□□□□□ -1.44
VPS4YPR173C SOG2Q08817 791 aa6.03□□□□□ -1.44
VPS4YPR173C YOR342CQ12182 319 aa6.03□□□□□ -1.44
VPS4YPR173C GLO4Q12320 285 aa6.03□□□□□ -1.44
VPS4YPR173C HSH49Q99181 213 aaPredicted RBP6.03□□□□□ -1.44
VPS4YPR173C NHA1Q99271 985 aa6.03□□□□□ -1.44
VPS4YPR173C YPR089WO13585 888 aa6.02□□□□□ -1.45
VPS4YPR173C HVG1P0CE11 249 aa6.02□□□□□ -1.45
VPS4YPR173C HSF1P10961 833 aa6.02□□□□□ -1.45
VPS4YPR173C YPK1P12688 680 aaKnown RBP6.02□□□□□ -1.45
VPS4YPR173C SNF4P12904 322 aa6.02□□□□□ -1.45
VPS4YPR173C KSS1P14681 368 aa6.02□□□□□ -1.45
VPS4YPR173C ATP7P30902 174 aa6.02□□□□□ -1.45
VPS4YPR173C CCR4P31384 837 aaKnown RBP6.02□□□□□ -1.45
VPS4YPR173C MCR1P36060 302 aaKnown RBP6.02□□□□□ -1.45
VPS4YPR173C YBR138CP38277 524 aa6.02□□□□□ -1.45
VPS4YPR173C CRP1P38845 465 aaKnown RBP6.02□□□□□ -1.45
VPS4YPR173C SHU2P38957 223 aa6.02□□□□□ -1.45
VPS4YPR173C MND2P40577 368 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms