RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	NCB2	Q92317	146 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	YLR278C	Q05854	1341 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	RPL25	P04456	142 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TCP1	P12612	559 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	MRP7	P12687	371 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	GLN4	P13188	809 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	APA2	P22108	325 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	RIT1	P23796	513 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	MNE1	P24720	663 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	CTR86	P25355	563 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	PRR1	P28708	518 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	SUI1	P32911	108 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	MDL1	P33310	695 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	AKL1	P38080	1108 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	NTC20	P38302	140 aa	Predicted RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	IMD2	P38697	523 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	REV7	P38927	245 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	STT3	P39007	718 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	AVT6	P40074	448 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	AXL1	P40851	1208 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	ERG10	P41338	398 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
HOS3	YPL116W	GLG2	P47011	380 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	MPS3	P47069	682 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TMA22	P47089	198 aa	Predicted RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	LSM8	P47093	109 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	RSM26	P47141	266 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	MSE1	P48525	536 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	PRP24	P49960	444 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	HFM1	P51979	1187 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	VAC7	P53950	1165 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	ORC3	P54790	616 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	ARX1	Q03862	593 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	RUB1	Q03919	77 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	RAD30	Q04049	632 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	FMP42	Q04991	504 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	DFG5	Q05031	458 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	VPS38	Q05919	439 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	YPR147C	Q06522	304 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	NSE1	Q07913	336 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	HFI1	Q12060	488 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	NUR1	Q12066	484 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	MLP2	P40457	1679 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-H	O13535	1793 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-DR5	P0C2I2	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-DR6	P0C2I3	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-LR2	P0C2I5	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-PR2	P0C2J0	1756 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-JR1	P47098	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-ER1	Q03612	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-GR2	Q12269	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-OL	Q12273	1755 aa		4.1	□□□□□ -1.75
HOS3	YPL116W	TY1B-PL	Q12414	1755 aa	Known RBP	4.1	□□□□□ -1.75
HOS3	YPL116W	RPP0	P05317	312 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	TUB1	P09733	447 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	MATALPHA1	P0CY06	175 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	HMLALPHA1	P0CY07	175 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	PRP4	P20053	465 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	VAM7	P32912	316 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	CAB2	P40506	365 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	NPA3	P47122	385 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	PSP1	P50896	841 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	MTO1	P53070	669 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	MCM6	P53091	1017 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	YGR125W	P53273	1036 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	ELP3	Q02908	557 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	PEX25	Q02969	394 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	NHP10	Q03435	203 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	RMD1	Q03441	430 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	RSN1	Q03516	953 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	YMD8	Q03697	442 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	TDA9	Q04545	1251 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	ECM18	Q04623	453 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	HCR1	Q05775	265 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	DIA2	Q08496	732 aa	Predicted RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	GPN2	Q08726	347 aa	Predicted RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	PUS9	Q12069	462 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	LEU9	Q12166	604 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	YSP2	Q06681	1438 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	PDR5	P33302	1511 aa	Known RBP	4.09	□□□□□ -1.75
HOS3	YPL116W	ESP1	Q03018	1630 aa		4.09	□□□□□ -1.75
HOS3	YPL116W	ENO1	P00924	437 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	RPP1A	P05318	106 aa	Predicted RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	KIN28	P06242	306 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	CMD1	P06787	147 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	PCK1	P10963	549 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	CDC24	P11433	854 aa	Predicted RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	KGD1	P20967	1014 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	RNR1	P21524	888 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	ADP1	P25371	1049 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	IMG1	P25626	169 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	DBF4	P32325	704 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ERG1	P32476	496 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	CTF13	P35203	478 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms