RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W HIS5P07172 385 aa14.59□□□□□ -0.07
SHR5YOL110W RIM1P32445 135 aaKnown RBP14.59□□□□□ -0.07
SHR5YOL110W AEP1P32493 518 aa14.59□□□□□ -0.07
SHR5YOL110W GDA1P32621 518 aa14.59□□□□□ -0.07
SHR5YOL110W RPS14BP39516 138 aaKnown RBP14.59□□□□□ -0.07
SHR5YOL110W PAN6P40459 309 aa14.59□□□□□ -0.07
SHR5YOL110W PET117Q02771 107 aa14.59□□□□□ -0.07
SHR5YOL110W YPR114WQ06107 315 aa14.59□□□□□ -0.07
SHR5YOL110W TDA5Q06417 326 aaKnown RBP14.59□□□□□ -0.07
SHR5YOL110W ADY3Q07732 790 aa14.59□□□□□ -0.07
SHR5YOL110W RSB1Q08417 382 aa14.59□□□□□ -0.07
SHR5YOL110W PXA2P34230 853 aa14.58□□□□□ -0.08
SHR5YOL110W SQT1P35184 431 aa14.58□□□□□ -0.08
SHR5YOL110W CTF13P35203 478 aa14.58□□□□□ -0.08
SHR5YOL110W TRS85P46944 698 aa14.58□□□□□ -0.08
SHR5YOL110W PRM1P53835 661 aa14.58□□□□□ -0.08
SHR5YOL110W LCB5Q06147 687 aaKnown RBP14.58□□□□□ -0.08
SHR5YOL110W MPD2Q99316 277 aa14.58□□□□□ -0.08
SHR5YOL110W HSP26P15992 214 aaKnown RBP RIP-Chip data14.57□□□□□ -0.08not detected
SHR5YOL110W MNE1P24720 663 aa14.57□□□□□ -0.08
SHR5YOL110W EMC1P25574 760 aa14.57□□□□□ -0.08
SHR5YOL110W MSH1P25846 959 aa14.57□□□□□ -0.08
SHR5YOL110W HRR25P29295 494 aaKnown RBP14.57□□□□□ -0.08
SHR5YOL110W CYM1P32898 989 aa14.57□□□□□ -0.08
SHR5YOL110W IMP3P32899 183 aaPredicted RBP14.57□□□□□ -0.08
SHR5YOL110W YHI9P38765 294 aa14.57□□□□□ -0.08
SHR5YOL110W SEO1P39709 593 aa14.57□□□□□ -0.08
SHR5YOL110W TFG1P41895 735 aaPredicted RBP14.57□□□□□ -0.08
SHR5YOL110W RSM7P47150 247 aa14.57□□□□□ -0.08
SHR5YOL110W ARH1P48360 493 aa14.57□□□□□ -0.08
SHR5YOL110W PEX8P53248 589 aa14.57□□□□□ -0.08
SHR5YOL110W YDR109CQ04585 715 aa14.57□□□□□ -0.08
SHR5YOL110W RPS9AO13516 197 aaKnown RBP14.56□□□□□ -0.08
SHR5YOL110W FUS1P11710 512 aa14.56□□□□□ -0.08
SHR5YOL110W PMA2P19657 947 aa14.56□□□□□ -0.08
SHR5YOL110W STE13P33894 931 aa14.56□□□□□ -0.08
SHR5YOL110W LIN1P38852 340 aaPredicted RBP14.56□□□□□ -0.08
SHR5YOL110W YJL206CP39529 758 aa14.56□□□□□ -0.08
SHR5YOL110W MEF2P39677 819 aa14.56□□□□□ -0.08
SHR5YOL110W RMD8P43620 662 aa14.56□□□□□ -0.08
SHR5YOL110W CCT8P47079 568 aaKnown RBP14.56□□□□□ -0.08
SHR5YOL110W LIA1P47120 325 aaKnown RBP14.56□□□□□ -0.08
SHR5YOL110W CSN12P47130 423 aa14.56□□□□□ -0.08
SHR5YOL110W NSE1Q07913 336 aa14.56□□□□□ -0.08
SHR5YOL110W PER33Q12144 273 aa14.56□□□□□ -0.08
SHR5YOL110W SLP1Q12232 587 aa14.56□□□□□ -0.08
SHR5YOL110W KCS1Q12494 1050 aa14.56□□□□□ -0.08
SHR5YOL110W MRM1P25270 412 aa14.55□□□□□ -0.08
SHR5YOL110W BEM1P29366 551 aa14.55□□□□□ -0.08
SHR5YOL110W ALY1P36117 915 aa14.55□□□□□ -0.08
SHR5YOL110W VPS41P38959 992 aa14.55□□□□□ -0.08
SHR5YOL110W REF2P42073 533 aaPredicted RBP14.55□□□□□ -0.08
SHR5YOL110W YJR124CP47159 448 aa14.55□□□□□ -0.08
SHR5YOL110W MNT2P53059 558 aa14.55□□□□□ -0.08
SHR5YOL110W YGL140CP53120 1219 aa14.55□□□□□ -0.08
SHR5YOL110W YLR149CQ99296 730 aa14.55□□□□□ -0.08
SHR5YOL110W LEU1P07264 779 aaKnown RBP14.54□□□□□ -0.08
SHR5YOL110W NSP1P14907 823 aaKnown RBP14.54□□□□□ -0.08
SHR5YOL110W SEC14P24280 304 aaKnown RBP14.54□□□□□ -0.08
SHR5YOL110W SCD5P34758 872 aa14.54□□□□□ -0.08
SHR5YOL110W RRP14P36080 434 aaKnown RBP14.54□□□□□ -0.08
SHR5YOL110W PEP8P40335 379 aa14.54□□□□□ -0.08
SHR5YOL110W TES1P41903 349 aaKnown RBP14.54□□□□□ -0.08
SHR5YOL110W ATH1P48016 1211 aa14.54□□□□□ -0.08
SHR5YOL110W COG1P53079 417 aa14.54□□□□□ -0.08
SHR5YOL110W SPC105P53148 917 aa14.54□□□□□ -0.08
SHR5YOL110W MCP2Q06567 569 aa14.54□□□□□ -0.08
SHR5YOL110W SYT1Q06836 1226 aa14.54□□□□□ -0.08
SHR5YOL110W RGS2Q99188 309 aa14.54□□□□□ -0.08
SHR5YOL110W FPR1P20081 114 aaKnown RBP14.53□□□□□ -0.08
SHR5YOL110W BEM3P32873 1128 aa14.53□□□□□ -0.08
SHR5YOL110W TOM20P35180 183 aa14.53□□□□□ -0.08
SHR5YOL110W OSW5P40219 148 aa14.53□□□□□ -0.08
SHR5YOL110W YNL143CP53908 130 aa14.53□□□□□ -0.08
SHR5YOL110W TFB2Q02939 513 aa14.53□□□□□ -0.08
SHR5YOL110W YDR132CQ03900 495 aa14.53□□□□□ -0.08
SHR5YOL110W TAF11Q04226 346 aa14.53□□□□□ -0.08
SHR5YOL110W CET1O13297 549 aaPredicted RBP14.52□□□□□ -0.09
SHR5YOL110W MSF1P08425 469 aa14.52□□□□□ -0.09
SHR5YOL110W YJU3P28321 313 aa14.52□□□□□ -0.09
SHR5YOL110W GCD11P32481 527 aaKnown RBP14.52□□□□□ -0.09
SHR5YOL110W YJL107CP42947 387 aa14.52□□□□□ -0.09
SHR5YOL110W BUD32P53323 261 aa14.52□□□□□ -0.09
SHR5YOL110W YLR177WQ06251 628 aa14.52□□□□□ -0.09
SHR5YOL110W GCY1P14065 312 aaKnown RBP RIP-Chip data14.51□□□□□ -0.09not detected
SHR5YOL110W AMD2P22580 549 aa14.51□□□□□ -0.09
SHR5YOL110W AAD3P25612 363 aa14.51□□□□□ -0.09
SHR5YOL110W MSH2P25847 964 aa14.51□□□□□ -0.09
SHR5YOL110W LOS1P33418 1100 aaPredicted RBP14.51□□□□□ -0.09
SHR5YOL110W SLD2P34252 453 aa14.51□□□□□ -0.09
SHR5YOL110W HOS4P40480 1083 aa14.51□□□□□ -0.09
SHR5YOL110W SEC28P40509 296 aaKnown RBP14.51□□□□□ -0.09
SHR5YOL110W EMC4P53073 190 aa14.51□□□□□ -0.09
SHR5YOL110W YMR209CQ03648 457 aa14.51□□□□□ -0.09
SHR5YOL110W IRC10Q08118 586 aa14.51□□□□□ -0.09
SHR5YOL110W FRT1Q99332 602 aa14.51□□□□□ -0.09
SHR5YOL110W LDB7P38210 180 aa14.5□□□□□ -0.09
SHR5YOL110W YBR032WP38223 100 aa14.5□□□□□ -0.09
SHR5YOL110W MNN1P39106 762 aa14.5□□□□□ -0.09
SHR5YOL110W YIR007WP40566 764 aa14.5□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms