RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YMR155WQ03795 547 aa5.01□□□□□ -1.61
PSE1YMR308C YLR419WQ06698 1435 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C SPT6P23615 1451 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C AI2P03876 854 aa5.01□□□□□ -1.61
PSE1YMR308C MSS18P08593 268 aa5.01□□□□□ -1.61
PSE1YMR308C PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
PSE1YMR308C ELF1P36053 145 aa5.01□□□□□ -1.61
PSE1YMR308C MRPL10P36520 322 aa5.01□□□□□ -1.61
PSE1YMR308C GIP4P39732 760 aa5.01□□□□□ -1.61
PSE1YMR308C RSP5P39940 809 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C NTA1P40354 457 aa5.01□□□□□ -1.61
PSE1YMR308C GLG2P47011 380 aa5.01□□□□□ -1.61
PSE1YMR308C CPR6P53691 371 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C RAD30Q04049 632 aa5.01□□□□□ -1.61
PSE1YMR308C GTB1Q04924 702 aa5.01□□□□□ -1.61
PSE1YMR308C NCB2Q92317 146 aa5.01□□□□□ -1.61
PSE1YMR308C GCN4P03069 281 aa5.01□□□□□ -1.61
PSE1YMR308C PTC4P38089 393 aa5.01□□□□□ -1.61
PSE1YMR308C TDA11P38854 504 aa5.01□□□□□ -1.61
PSE1YMR308C CCC2P38995 1004 aa5.01□□□□□ -1.61
PSE1YMR308C RPH1P39956 796 aa5.01□□□□□ -1.61
PSE1YMR308C VAB2P40003 282 aa5.01□□□□□ -1.61
PSE1YMR308C LCB2P40970 561 aa5.01□□□□□ -1.61
PSE1YMR308C IDS2P46958 469 aa5.01□□□□□ -1.61
PSE1YMR308C LSM1P47017 172 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C YJR111CP47148 283 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C YKE2P52553 114 aa5.01□□□□□ -1.61
PSE1YMR308C MCM6P53091 1017 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C ZRG17P53735 605 aa5.01□□□□□ -1.61
PSE1YMR308C VPS9P54787 451 aa5.01□□□□□ -1.61
PSE1YMR308C UFD2P54860 961 aa5.01□□□□□ -1.61
PSE1YMR308C RPT6Q01939 405 aaKnown RBP5.01□□□□□ -1.61
PSE1YMR308C SPH1Q06160 661 aa5.01□□□□□ -1.61
PSE1YMR308C MUM3Q08750 479 aa5.01□□□□□ -1.61
PSE1YMR308C UFD4P33202 1483 aa5□□□□□ -1.61
PSE1YMR308C SBP1P10080 294 aaKnown RBP5□□□□□ -1.61
PSE1YMR308C GPI10P30777 616 aa5□□□□□ -1.61
PSE1YMR308C AIM3P38266 947 aaKnown RBP5□□□□□ -1.61
PSE1YMR308C NEM1P38757 446 aa5□□□□□ -1.61
PSE1YMR308C SUR2P38992 349 aa5□□□□□ -1.61
PSE1YMR308C FHL1P39521 936 aa5□□□□□ -1.61
PSE1YMR308C GIM4P40005 111 aaKnown RBP5□□□□□ -1.61
PSE1YMR308C ALG8P40351 577 aa5□□□□□ -1.61
PSE1YMR308C RRN7P40992 514 aa5□□□□□ -1.61
PSE1YMR308C HXT14P42833 540 aa5□□□□□ -1.61
PSE1YMR308C YGL176CP46945 554 aa5□□□□□ -1.61
PSE1YMR308C NET1P47035 1189 aa5□□□□□ -1.61
PSE1YMR308C BPL1P48445 690 aaPredicted RBP5□□□□□ -1.61
PSE1YMR308C BRO1P48582 844 aa5□□□□□ -1.61
PSE1YMR308C ORC3P54790 616 aa5□□□□□ -1.61
PSE1YMR308C ARX1Q03862 593 aaKnown RBP5□□□□□ -1.61
PSE1YMR308C FLC1Q08967 793 aa5□□□□□ -1.61
PSE1YMR308C MTR10Q99189 972 aa5□□□□□ -1.61
PSE1YMR308C MET5P47169 1442 aa5□□□□□ -1.61
PSE1YMR308C HAP1P0CE41 1502 aa5□□□□□ -1.61
PSE1YMR308C PHR1P05066 565 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
PSE1YMR308C POL3P15436 1097 aa5□□□□□ -1.61
PSE1YMR308C AMD2P22580 549 aa5□□□□□ -1.61
PSE1YMR308C CTR86P25355 563 aa5□□□□□ -1.61
PSE1YMR308C RRT12P25381 491 aa5□□□□□ -1.61
PSE1YMR308C IMG1P25626 169 aa5□□□□□ -1.61
PSE1YMR308C SPC29P33419 253 aa5□□□□□ -1.61
PSE1YMR308C SBE22P38814 852 aa5□□□□□ -1.61
PSE1YMR308C UFE1P41834 346 aa5□□□□□ -1.61
PSE1YMR308C ARE2P53629 642 aaKnown RBP5□□□□□ -1.61
PSE1YMR308C SMA1Q02651 245 aa5□□□□□ -1.61
PSE1YMR308C TIM50Q02776 476 aa5□□□□□ -1.61
PSE1YMR308C SWP1Q02795 286 aa5□□□□□ -1.61
PSE1YMR308C YPL071CQ02864 156 aa5□□□□□ -1.61
PSE1YMR308C SEG1Q04279 960 aa5□□□□□ -1.61
PSE1YMR308C THI73Q07904 523 aa5□□□□□ -1.61
PSE1YMR308C NFT1P0CE68 1218 aa4.99□□□□□ -1.61
PSE1YMR308C FRS1P15624 595 aaKnown RBP4.99□□□□□ -1.61
PSE1YMR308C DBF4P32325 704 aa4.99□□□□□ -1.61
PSE1YMR308C RAD24P32641 659 aa4.99□□□□□ -1.61
PSE1YMR308C LIP5P32875 414 aa4.99□□□□□ -1.61
PSE1YMR308C NIC96P34077 839 aa4.99□□□□□ -1.61
PSE1YMR308C SPP381P38282 291 aaPredicted RBP4.99□□□□□ -1.61
PSE1YMR308C SLM1P40485 686 aa4.99□□□□□ -1.61
PSE1YMR308C PSP2P50109 593 aaKnown RBP4.99□□□□□ -1.61
PSE1YMR308C HFD1Q04458 532 aa4.99□□□□□ -1.61
PSE1YMR308C NGL1Q08213 363 aaKnown RBP4.99□□□□□ -1.61
PSE1YMR308C SPE3Q12074 293 aaKnown RBP4.99□□□□□ -1.61
PSE1YMR308C SNU23Q12368 194 aaPredicted RBP4.99□□□□□ -1.61
PSE1YMR308C NCA2Q12374 616 aa4.99□□□□□ -1.61
PSE1YMR308C GAL4P04386 881 aa4.99□□□□□ -1.61
PSE1YMR308C MATALPHA1P0CY06 175 aa4.99□□□□□ -1.61
PSE1YMR308C HMLALPHA1P0CY07 175 aa4.99□□□□□ -1.61
PSE1YMR308C SRS2P12954 1174 aa4.99□□□□□ -1.61
PSE1YMR308C KGD1P20967 1014 aaKnown RBP4.99□□□□□ -1.61
PSE1YMR308C SPO23P33757 523 aa4.99□□□□□ -1.61
PSE1YMR308C YER010CP40011 234 aa4.99□□□□□ -1.61
PSE1YMR308C NAS6P50086 228 aa4.99□□□□□ -1.61
PSE1YMR308C SCY1P53009 804 aa4.99□□□□□ -1.61
PSE1YMR308C NUT1P53114 1132 aa4.99□□□□□ -1.61
PSE1YMR308C EOS1P53938 366 aa4.99□□□□□ -1.61
PSE1YMR308C UME1Q03010 460 aa4.99□□□□□ -1.61
PSE1YMR308C GCN5Q03330 439 aa4.99□□□□□ -1.61
PSE1YMR308C YDR239CQ03780 787 aa4.99□□□□□ -1.61
PSE1YMR308C BCP1Q06338 283 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms