RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	CLP1	Q08685	445 aa	Predicted RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	TCO89	Q08921	799 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RTP1	Q12751	981 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RIP1	P08067	215 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	VPS17	P32913	551 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	ELF1	P36053	145 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	SDP1	P40479	209 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	1.42	□□□□□ -2.18	not detected
CLU1	YMR012W	EXG2	P52911	562 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	NMA2	P53204	395 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	PBP1	P53297	722 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	YGR250C	P53316	781 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	ESF2	P53743	316 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	ADE16	P54113	591 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	SSL2	Q00578	843 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RSA3	Q05942	220 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	HSP42	Q12329	375 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	1.42	□□□□□ -2.18	not detected
CLU1	YMR012W	YDR524C-B	Q3E6R4	66 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	PDE2	P06776	526 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	STE3	P06783	470 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	HMG2	P12684	1045 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YPK1	P12688	680 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	YUR1	P26725	428 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	EMP70	P32802	667 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RIB7	P33312	244 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YBL055C	P34220	418 aa	Predicted RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	EMC3	P36039	253 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	CST26	P38226	397 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	RIM11	P38615	370 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	MNL1	P38888	796 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	PIK1	P39104	1066 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YJL068C	P40363	299 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	OGG1	P53397	376 aa	Predicted RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	BSC5	P53755	489 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	ATG21	Q02887	496 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	CDD1	Q06549	142 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YDL057W	Q07379	328 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YOL159C	Q08300	171 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	PCL8	Q08966	492 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	ELG1	Q12050	791 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	PDH1	Q12428	516 aa	Known RBP	1.42	□□□□□ -2.18
CLU1	YMR012W	KCS1	Q12494	1050 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	YBR182C-A	Q8TGU6	64 aa		1.42	□□□□□ -2.18
CLU1	YMR012W	IKI3	Q06706	1349 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	DPB3	P27344	201 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	ANP1	P32629	500 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	PMT1	P33775	817 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	DID4	P36108	232 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	YBR287W	P38355	427 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	GIC1	P38785	314 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CAJ1	P39101	391 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CAF16	P43569	289 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	PRP31	P49704	494 aa	Predicted RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	NOP15	P53927	220 aa	Predicted RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	HEF3	P53978	1044 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	ECM7	Q06200	448 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	BUD7	Q08754	746 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	RIM20	Q12033	661 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	PYC1	P11154	1178 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	CDC26	P14724	124 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	OSM1	P21375	501 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	BEM1	P29366	551 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	LRG1	P35688	1017 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	MRPL37	P36532	105 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	ANS1	P38832	159 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	SKN7	P38889	622 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CEM1	P39525	442 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	VFA1	P40080	203 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	UBX6	P47049	396 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	GUP1	P53154	560 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	DAM1	P53267	343 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	GPD1	Q00055	391 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	MTD1	Q02046	320 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	WAR1	Q03631	944 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	THI72	Q08579	599 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	GNT1	Q12096	491 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CET1	O13297	549 aa	Predicted RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	TUB2	P02557	457 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	HIS5	P07172	385 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	UNG1	P12887	359 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	PPZ1	P26570	692 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CMK1	P27466	446 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	URK1	P27515	501 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	CAP1	P28495	268 aa	Known RBP	1.41	□□□□□ -2.18
CLU1	YMR012W	MTC6	P38849	526 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	UBP5	P39944	805 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	RIC1	P40395	1056 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	MET12	P46151	657 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	OCA2	P53949	197 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	RCM1	P53972	490 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	YKR011C	Q02209	353 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	SIZ1	Q04195	904 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	ROY1	Q04847	553 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	TGL5	Q12043	749 aa		1.41	□□□□□ -2.18
CLU1	YMR012W	RPS4A	P0CX35	261 aa	Known RBP	1.4	□□□□□ -2.18
CLU1	YMR012W	RPS4B	P0CX36	261 aa	Known RBP	1.4	□□□□□ -2.18
CLU1	YMR012W	MRP7	P12687	371 aa		1.4	□□□□□ -2.18
CLU1	YMR012W	SEC62	P21825	274 aa		1.4	□□□□□ -2.18
CLU1	YMR012W	POT1	P27796	417 aa	Known RBP RIP-Chip data	1.4	□□□□□ -2.18	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms