RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C MRPL9P31334 269 aa3.14□□□□□ -1.91
TCD1YHR003C VMA8P32610 256 aaKnown RBP3.14□□□□□ -1.91
TCD1YHR003C PES4P39684 611 aa3.14□□□□□ -1.91
TCD1YHR003C YFL015CP43578 164 aa3.14□□□□□ -1.91
TCD1YHR003C YML6P51998 286 aa3.14□□□□□ -1.91
TCD1YHR003C MTD1Q02046 320 aaKnown RBP3.14□□□□□ -1.91
TCD1YHR003C YMR018WQ04364 514 aa3.14□□□□□ -1.91
TCD1YHR003C PEX15Q08215 383 aa3.14□□□□□ -1.91
TCD1YHR003C SSM4P40318 1319 aa3.14□□□□□ -1.91
TCD1YHR003C PDR11P40550 1411 aa3.13□□□□□ -1.91
TCD1YHR003C AQY1P0CD91 305 aa3.13□□□□□ -1.91
TCD1YHR003C CBP3P21560 335 aa3.13□□□□□ -1.91
TCD1YHR003C MSH1P25846 959 aa3.13□□□□□ -1.91
TCD1YHR003C TMT1P32643 299 aa3.13□□□□□ -1.91
TCD1YHR003C ECM32P32644 1121 aaKnown RBP3.13□□□□□ -1.91
TCD1YHR003C XRS2P33301 854 aa3.13□□□□□ -1.91
TCD1YHR003C YKL100CP34248 587 aa3.13□□□□□ -1.91
TCD1YHR003C EXO1P39875 702 aa3.13□□□□□ -1.91
TCD1YHR003C SSP120P39931 234 aaKnown RBP3.13□□□□□ -1.91
TCD1YHR003C RAD26P40352 1085 aa3.13□□□□□ -1.91
TCD1YHR003C ERR3P42222 437 aa3.13□□□□□ -1.91
TCD1YHR003C YJL043WP47053 257 aa3.13□□□□□ -1.91
TCD1YHR003C MNT2P53059 558 aa3.13□□□□□ -1.91
TCD1YHR003C YGR016WP53209 190 aa3.13□□□□□ -1.91
TCD1YHR003C ATP23P53722 227 aa3.13□□□□□ -1.91
TCD1YHR003C SEC5P89102 971 aa3.13□□□□□ -1.91
TCD1YHR003C GTR1Q00582 310 aa3.13□□□□□ -1.91
TCD1YHR003C WAR1Q03631 944 aa3.13□□□□□ -1.91
TCD1YHR003C EIS1Q05050 843 aaKnown RBP3.13□□□□□ -1.91
TCD1YHR003C BLS1Q06071 122 aa3.13□□□□□ -1.91
TCD1YHR003C HOS1Q12214 470 aa3.13□□□□□ -1.91
TCD1YHR003C YRF1-2P40105 1681 aa3.13□□□□□ -1.91
TCD1YHR003C YPK1P12688 680 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C SPO16P17122 198 aa3.12□□□□□ -1.91
TCD1YHR003C CMK1P27466 446 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C VPH1P32563 840 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C PXA2P34230 853 aa3.12□□□□□ -1.91
TCD1YHR003C LRP1P38801 184 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C STL1P39932 569 aa3.12□□□□□ -1.91
TCD1YHR003C ULP2P40537 1034 aaPredicted RBP3.12□□□□□ -1.91
TCD1YHR003C GPD2P41911 440 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C TDA10P42938 290 aa3.12□□□□□ -1.91
TCD1YHR003C UPF3P48412 387 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C PUS4P48567 403 aaKnown RBP3.12□□□□□ -1.91
TCD1YHR003C GPI8P49018 411 aa3.12□□□□□ -1.91
TCD1YHR003C TEP1P53916 434 aa3.12□□□□□ -1.91
TCD1YHR003C CEG1Q01159 459 aaPredicted RBP3.12□□□□□ -1.91
TCD1YHR003C YAP7Q08182 245 aa3.12□□□□□ -1.91
TCD1YHR003C CRT10Q08226 957 aa3.12□□□□□ -1.91
TCD1YHR003C YOL114CQ12322 202 aa3.12□□□□□ -1.91
TCD1YHR003C YPR117WQ06116 2489 aa3.12□□□□□ -1.91
TCD1YHR003C GCN2P15442 1659 aa3.11□□□□□ -1.91
TCD1YHR003C SEC18P18759 758 aaKnown RBP3.11□□□□□ -1.91
TCD1YHR003C SAN1P22470 610 aa3.11□□□□□ -1.91
TCD1YHR003C ARG1P22768 420 aa3.11□□□□□ -1.91
TCD1YHR003C GSY2P27472 705 aa3.11□□□□□ -1.91
TCD1YHR003C BRF1P29056 596 aa3.11□□□□□ -1.91
TCD1YHR003C CDC5P32562 705 aa3.11□□□□□ -1.91
TCD1YHR003C EAF5P39995 279 aa3.11□□□□□ -1.91
TCD1YHR003C MAD2P40958 196 aa3.11□□□□□ -1.91
TCD1YHR003C PSA1P41940 361 aaKnown RBP3.11□□□□□ -1.91
TCD1YHR003C IRC6P43615 237 aa3.11□□□□□ -1.91
TCD1YHR003C NMD5P46970 1048 aa3.11□□□□□ -1.91
TCD1YHR003C RBG2P53295 368 aaKnown RBP3.11□□□□□ -1.91
TCD1YHR003C PRP3Q03338 469 aaPredicted RBP3.11□□□□□ -1.91
TCD1YHR003C ARA2Q04212 335 aa3.11□□□□□ -1.91
TCD1YHR003C TDA9Q04545 1251 aa3.11□□□□□ -1.91
TCD1YHR003C YLR287CQ05881 355 aa3.11□□□□□ -1.91
TCD1YHR003C ECM38Q05902 660 aaPredicted RBP3.11□□□□□ -1.91
TCD1YHR003C PSR1Q07800 427 aa3.11□□□□□ -1.91
TCD1YHR003C RTK1Q12100 620 aaPredicted RBP3.11□□□□□ -1.91
TCD1YHR003C RDL1Q12305 139 aaKnown RBP3.11□□□□□ -1.91
TCD1YHR003C SEC3P33332 1336 aaKnown RBP3.11□□□□□ -1.91
TCD1YHR003C SEM1O94742 89 aa3.1□□□□□ -1.91
TCD1YHR003C URA3P03962 267 aa3.1□□□□□ -1.91
TCD1YHR003C RAD16P31244 790 aa3.1□□□□□ -1.91
TCD1YHR003C PAH1P32567 862 aa3.1□□□□□ -1.91
TCD1YHR003C SDH8P38345 138 aa3.1□□□□□ -1.91
TCD1YHR003C KAP123P40069 1113 aaKnown RBP3.1□□□□□ -1.91
TCD1YHR003C RIC1P40395 1056 aa3.1□□□□□ -1.91
TCD1YHR003C YNR071CP53757 342 aa3.1□□□□□ -1.91
TCD1YHR003C ERO1Q03103 563 aa3.1□□□□□ -1.91
TCD1YHR003C TAF11Q04226 346 aa3.1□□□□□ -1.91
TCD1YHR003C TRI1Q05024 226 aa3.1□□□□□ -1.91
TCD1YHR003C BSP1Q06604 576 aa3.1□□□□□ -1.91
TCD1YHR003C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
TCD1YHR003C YPL191CQ08930 360 aa3.1□□□□□ -1.91
TCD1YHR003C DIN7Q12086 430 aa3.1□□□□□ -1.91
TCD1YHR003C AHA1Q12449 350 aaKnown RBP3.1□□□□□ -1.91
TCD1YHR003C ENT1Q12518 454 aa3.1□□□□□ -1.91
TCD1YHR003C HSH49Q99181 213 aaPredicted RBP3.1□□□□□ -1.91
TCD1YHR003C SEC7P11075 2009 aaKnown RBP3.1□□□□□ -1.91
TCD1YHR003C TY1B-AO13527 1196 aaKnown RBP3.09□□□□□ -1.91
TCD1YHR003C AAC3P18238 307 aa3.09□□□□□ -1.91
TCD1YHR003C PRP45P28004 379 aaPredicted RBP3.09□□□□□ -1.91
TCD1YHR003C MUD2P36084 527 aaKnown RBP3.09□□□□□ -1.91
TCD1YHR003C RXT2P38255 430 aa3.09□□□□□ -1.91
TCD1YHR003C MEP1P40260 492 aa3.09□□□□□ -1.91
TCD1YHR003C YIL092WP40497 633 aa3.09□□□□□ -1.91
TCD1YHR003C GSM1P42950 618 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms