RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W CDC12P32468 407 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W LYP1P32487 611 aa5.93□□□□□ -1.46
SKN1YGR143W FBP26P32604 452 aa5.93□□□□□ -1.46
SKN1YGR143W MRP4P32902 394 aa5.93□□□□□ -1.46
SKN1YGR143W YKL069WP36088 180 aa5.93□□□□□ -1.46
SKN1YGR143W PAN5P38787 379 aa5.93□□□□□ -1.46
SKN1YGR143W YER130CP39959 443 aa5.93□□□□□ -1.46
SKN1YGR143W BUD16P39988 312 aa5.93□□□□□ -1.46
SKN1YGR143W TFG2P41896 400 aaPredicted RBP5.93□□□□□ -1.46
SKN1YGR143W RSM26P47141 266 aa5.93□□□□□ -1.46
SKN1YGR143W VPS75P53853 264 aa5.93□□□□□ -1.46
SKN1YGR143W SAM50P53969 484 aa5.93□□□□□ -1.46
SKN1YGR143W RTN1Q04947 295 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W TAF9Q05027 157 aa5.93□□□□□ -1.46
SKN1YGR143W ECM7Q06200 448 aa5.93□□□□□ -1.46
SKN1YGR143W YDL114WQ07530 308 aa5.93□□□□□ -1.46
SKN1YGR143W PPM2Q08282 695 aa5.93□□□□□ -1.46
SKN1YGR143W ATG11Q12527 1178 aa5.93□□□□□ -1.46
SKN1YGR143W APM4Q99186 491 aa5.93□□□□□ -1.46
SKN1YGR143W DDP1Q99321 188 aaKnown RBP5.93□□□□□ -1.46
SKN1YGR143W CET1O13297 549 aaPredicted RBP5.92□□□□□ -1.46
SKN1YGR143W PHO5P00635 467 aa5.92□□□□□ -1.46
SKN1YGR143W TUB2P02557 457 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W ARG4P04076 463 aaPredicted RBP5.92□□□□□ -1.46
SKN1YGR143W RPP1AP05318 106 aaPredicted RBP5.92□□□□□ -1.46
SKN1YGR143W PYC1P11154 1178 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W ENA1P13587 1091 aa5.92□□□□□ -1.46
SKN1YGR143W CHS2P14180 963 aa5.92□□□□□ -1.46
SKN1YGR143W SPS22P25380 463 aa5.92□□□□□ -1.46
SKN1YGR143W FUN26P31381 517 aa5.92□□□□□ -1.46
SKN1YGR143W PRX1P34227 261 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W VMA7P39111 118 aa5.92□□□□□ -1.46
SKN1YGR143W CAB2P40506 365 aa5.92□□□□□ -1.46
SKN1YGR143W TAF4P50105 388 aa5.92□□□□□ -1.46
SKN1YGR143W COS6P53344 381 aa5.92□□□□□ -1.46
SKN1YGR143W DBP6P53734 629 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W ENA2Q01896 1091 aa5.92□□□□□ -1.46
SKN1YGR143W KAP95Q06142 861 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W PDR8Q06149 701 aa5.92□□□□□ -1.46
SKN1YGR143W PHO92Q06390 306 aa5.92□□□□□ -1.46
SKN1YGR143W YOR378WQ08902 515 aa5.92□□□□□ -1.46
SKN1YGR143W NCA2Q12374 616 aa5.92□□□□□ -1.46
SKN1YGR143W SPO21Q12411 609 aa5.92□□□□□ -1.46
SKN1YGR143W RMP1Q12530 201 aa5.92□□□□□ -1.46
SKN1YGR143W ENA5Q12691 1091 aa5.92□□□□□ -1.46
SKN1YGR143W LAG2Q92325 660 aa5.92□□□□□ -1.46
SKN1YGR143W RPP2BP02400 110 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W HOM2P13663 365 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W NSP1P14907 823 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W PHO13P19881 312 aa5.92□□□□□ -1.46
SKN1YGR143W ATG22P25568 528 aa5.92□□□□□ -1.46
SKN1YGR143W SRP40P32583 406 aaPredicted RBP5.92□□□□□ -1.46
SKN1YGR143W ANR2P36090 516 aaPredicted RBP5.92□□□□□ -1.46
SKN1YGR143W PXL1P36166 706 aa5.92□□□□□ -1.46
SKN1YGR143W MRPL37P36532 105 aa5.92□□□□□ -1.46
SKN1YGR143W KTR4P38131 464 aa5.92□□□□□ -1.46
SKN1YGR143W SPF1P39986 1215 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W YIL166CP40445 542 aa5.92□□□□□ -1.46
SKN1YGR143W BNA1P47096 177 aa5.92□□□□□ -1.46
SKN1YGR143W AIM24P47127 394 aa5.92□□□□□ -1.46
SKN1YGR143W RMR1P53060 241 aa5.92□□□□□ -1.46
SKN1YGR143W CAF40P53829 373 aa5.92□□□□□ -1.46
SKN1YGR143W CRR1Q05790 422 aa5.92□□□□□ -1.46
SKN1YGR143W GRS2Q06817 618 aa5.92□□□□□ -1.46
SKN1YGR143W TIF6Q12522 245 aaKnown RBP5.92□□□□□ -1.46
SKN1YGR143W YBR298C-AQ8TGK4 73 aa5.92□□□□□ -1.46
SKN1YGR143W ATP6P00854 259 aa5.91□□□□□ -1.46
SKN1YGR143W BAS1P22035 811 aa5.91□□□□□ -1.46
SKN1YGR143W MRPL32P25348 183 aa5.91□□□□□ -1.46
SKN1YGR143W PMT2P31382 759 aa5.91□□□□□ -1.46
SKN1YGR143W TFC1P32367 649 aa5.91□□□□□ -1.46
SKN1YGR143W FLC2P39719 783 aa5.91□□□□□ -1.46
SKN1YGR143W SSP120P39931 234 aaKnown RBP5.91□□□□□ -1.46
SKN1YGR143W IRC24P40580 263 aa5.91□□□□□ -1.46
SKN1YGR143W IRC6P43615 237 aa5.91□□□□□ -1.46
SKN1YGR143W IRC8P47046 822 aa5.91□□□□□ -1.46
SKN1YGR143W TMA20P89886 181 aaPredicted RBP5.91□□□□□ -1.46
SKN1YGR143W NHP10Q03435 203 aa5.91□□□□□ -1.46
SKN1YGR143W VHS1Q03785 461 aa5.91□□□□□ -1.46
SKN1YGR143W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SKN1YGR143W SKI7Q08491 747 aaPredicted RBP5.91□□□□□ -1.46
SKN1YGR143W KEL3Q08979 651 aaPredicted RBP5.91□□□□□ -1.46
SKN1YGR143W RUP1Q12242 671 aa5.91□□□□□ -1.46
SKN1YGR143W AVL9Q12500 764 aa5.91□□□□□ -1.46
SKN1YGR143W CDC8P00572 216 aa5.91□□□□□ -1.46
SKN1YGR143W MRP2P10663 115 aaPredicted RBP5.91□□□□□ -1.46
SKN1YGR143W GAL3P13045 520 aa5.91□□□□□ -1.46
SKN1YGR143W STF2P16965 84 aa5.91□□□□□ -1.46
SKN1YGR143W GSY2P27472 705 aa5.91□□□□□ -1.46
SKN1YGR143W IRE1P32361 1115 aa5.91□□□□□ -1.46
SKN1YGR143W MOT2P34909 587 aaKnown RBP5.91□□□□□ -1.46
SKN1YGR143W AST1P35183 429 aa5.91□□□□□ -1.46
SKN1YGR143W NEM1P38757 446 aa5.91□□□□□ -1.46
SKN1YGR143W ORC6P38826 435 aa5.91□□□□□ -1.46
SKN1YGR143W PZF1P39933 429 aa5.91□□□□□ -1.46
SKN1YGR143W ASG1P40467 964 aa5.91□□□□□ -1.46
SKN1YGR143W CIN5P40917 295 aa5.91□□□□□ -1.46
SKN1YGR143W FMP32P43557 207 aa5.91□□□□□ -1.46
SKN1YGR143W AIP1P46680 615 aaKnown RBP5.91□□□□□ -1.46
SKN1YGR143W NMD5P46970 1048 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms