RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C MMS4P38257 691 aa2.73□□□□□ -1.97
SSN2YDR443C TSL1P38427 1098 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C SRP68P38687 599 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C UTP9P38882 575 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C SSN3P39073 555 aa2.73□□□□□ -1.97
SSN2YDR443C YMR124WP39523 943 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C PDR16P53860 351 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C GPD1Q00055 391 aaKnown RBP2.73□□□□□ -1.97
SSN2YDR443C YAP6Q03935 383 aa2.73□□□□□ -1.97
SSN2YDR443C ICL2Q12031 575 aa2.73□□□□□ -1.97
SSN2YDR443C ATG11Q12527 1178 aa2.73□□□□□ -1.97
SSN2YDR443C SSK22P25390 1331 aaPredicted RBP2.72□□□□□ -1.97
SSN2YDR443C FUS1P11710 512 aa2.72□□□□□ -1.97
SSN2YDR443C BOS1P25385 244 aa2.72□□□□□ -1.97
SSN2YDR443C MRP20P32387 263 aa2.72□□□□□ -1.97
SSN2YDR443C BUD2P33314 1104 aa2.72□□□□□ -1.97
SSN2YDR443C UBP11P36026 717 aa2.72□□□□□ -1.97
SSN2YDR443C DAD2P36162 133 aa2.72□□□□□ -1.97
SSN2YDR443C YBL086CP38177 466 aa2.72□□□□□ -1.97
SSN2YDR443C YHR033WP38690 423 aa2.72□□□□□ -1.97
SSN2YDR443C NPP2P39997 493 aa2.72□□□□□ -1.97
SSN2YDR443C MSB3P48566 633 aaPredicted RBP2.72□□□□□ -1.97
SSN2YDR443C ARP4P80428 489 aa2.72□□□□□ -1.97
SSN2YDR443C SKS1Q12505 502 aa2.72□□□□□ -1.97
SSN2YDR443C RPS9AO13516 197 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C TDH1P00360 332 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C RPL19AP0CX82 189 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C RPL19BP0CX83 189 aaPredicted RBP2.72□□□□□ -1.97
SSN2YDR443C ARO3P14843 370 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C MGM101P32787 269 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C CTF13P35203 478 aa2.72□□□□□ -1.97
SSN2YDR443C AHP1P38013 176 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C INP51P40559 946 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C MAD2P40958 196 aa2.72□□□□□ -1.97
SSN2YDR443C ROK1P45818 564 aaPredicted RBP2.72□□□□□ -1.97
SSN2YDR443C TRF5P48561 642 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C ALT2P52892 507 aa2.72□□□□□ -1.97
SSN2YDR443C NNF2P53253 936 aa2.72□□□□□ -1.97
SSN2YDR443C LEE1Q02799 301 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C RBA50Q04418 439 aa2.72□□□□□ -1.97
SSN2YDR443C STP3Q05937 343 aa2.72□□□□□ -1.97
SSN2YDR443C THI22Q06490 572 aa2.72□□□□□ -1.97
SSN2YDR443C YLR413WQ06689 675 aa2.72□□□□□ -1.97
SSN2YDR443C IOC2Q12072 812 aa2.72□□□□□ -1.97
SSN2YDR443C DIN7Q12086 430 aa2.72□□□□□ -1.97
SSN2YDR443C RBD2Q12270 262 aa2.72□□□□□ -1.97
SSN2YDR443C YML133CQ03099 1374 aa2.72□□□□□ -1.97
SSN2YDR443C YLL066CQ99208 1374 aa2.72□□□□□ -1.97
SSN2YDR443C RPS17AP02407 136 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C RPB2P08518 1224 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C RPS17BP14127 136 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C CLN1P20437 546 aa2.72□□□□□ -1.97
SSN2YDR443C TFA2P36145 328 aa2.72□□□□□ -1.97
SSN2YDR443C POA1P38218 177 aa2.72□□□□□ -1.97
SSN2YDR443C SLX1P38324 304 aa2.72□□□□□ -1.97
SSN2YDR443C YDR089WP38966 869 aa2.72□□□□□ -1.97
SSN2YDR443C YHB1P39676 399 aaKnown RBP2.72□□□□□ -1.97
SSN2YDR443C PXA1P41909 870 aa2.72□□□□□ -1.97
SSN2YDR443C SIP4P46954 829 aa2.72□□□□□ -1.97
SSN2YDR443C ARP5P53946 755 aa2.72□□□□□ -1.97
SSN2YDR443C YBL029C-AQ3E756 94 aa2.72□□□□□ -1.97
SSN2YDR443C YBR182C-AQ8TGU6 64 aa2.72□□□□□ -1.97
SSN2YDR443C RPI1P23250 407 aaKnown RBP2.71□□□□□ -1.97
SSN2YDR443C TAF5P38129 798 aa2.71□□□□□ -1.97
SSN2YDR443C RRM3P38766 723 aa2.71□□□□□ -1.97
SSN2YDR443C AFG3P39925 761 aa2.71□□□□□ -1.97
SSN2YDR443C YER158CP40095 573 aa2.71□□□□□ -1.97
SSN2YDR443C FET4P40988 552 aa2.71□□□□□ -1.97
SSN2YDR443C BUD8P41698 603 aa2.71□□□□□ -1.97
SSN2YDR443C MLC1P53141 149 aa2.71□□□□□ -1.97
SSN2YDR443C YNR065CP53751 1116 aa2.71□□□□□ -1.97
SSN2YDR443C DCI1Q08558 271 aa2.71□□□□□ -1.97
SSN2YDR443C YOL107WQ12239 342 aa2.71□□□□□ -1.97
SSN2YDR443C PWP1P21304 576 aaKnown RBP2.71□□□□□ -1.98
SSN2YDR443C VPS3P23643 1011 aa2.71□□□□□ -1.98
SSN2YDR443C ADH7P25377 361 aa2.71□□□□□ -1.98
SSN2YDR443C SEF1P34228 1148 aa2.71□□□□□ -1.98
SSN2YDR443C FLR1P38124 548 aa2.71□□□□□ -1.98
SSN2YDR443C MAL33P38157 468 aa2.71□□□□□ -1.98
SSN2YDR443C PIH1P38768 344 aa2.71□□□□□ -1.98
SSN2YDR443C CAB2P40506 365 aa2.71□□□□□ -1.98
SSN2YDR443C YFR018CP43599 363 aa2.71□□□□□ -1.98
SSN2YDR443C ZAP1P47043 880 aa2.71□□□□□ -1.98
SSN2YDR443C HOP2P53187 214 aa2.71□□□□□ -1.98
SSN2YDR443C YNR071CP53757 342 aa2.71□□□□□ -1.98
SSN2YDR443C AQR1P53943 586 aa2.71□□□□□ -1.98
SSN2YDR443C MEC3Q02574 474 aa2.71□□□□□ -1.98
SSN2YDR443C YPS7Q06325 596 aa2.71□□□□□ -1.98
SSN2YDR443C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SSN2YDR443C ISN1Q99312 450 aa2.71□□□□□ -1.98
SSN2YDR443C FBP1P09201 348 aa2.71□□□□□ -1.98
SSN2YDR443C RPL3P14126 387 aaKnown RBP2.71□□□□□ -1.98
SSN2YDR443C ACO1P19414 778 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SSN2YDR443C ERG6P25087 383 aaKnown RBP2.71□□□□□ -1.98
SSN2YDR443C SRB2P34162 210 aa2.71□□□□□ -1.98
SSN2YDR443C YBL055CP34220 418 aaPredicted RBP2.71□□□□□ -1.98
SSN2YDR443C MET18P40469 1032 aa2.71□□□□□ -1.98
SSN2YDR443C GLO1P50107 326 aa2.71□□□□□ -1.98
SSN2YDR443C VPS4P52917 437 aa2.71□□□□□ -1.98
SSN2YDR443C MNT2P53059 558 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms