RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
PHGDH-219ENST00000641513 ATAD5Q96QE3 1844 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 NFKBIEO00221 500 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 FIBPO43427 364 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 DDAH1O94760 285 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 FDPSP14324 419 aaKnown RBP10.28□□□□□ -0.76
PHGDH-219ENST00000641513 CXCL9Q07325 125 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 TNIP1Q15025 636 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-219ENST00000641513 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 PRMT6Q96LA8 375 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-219ENST00000641513 ALG1Q9BT22 464 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 GDPD2Q9HCC8 539 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 SERPINB13Q9UIV8 391 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 STX8Q9UNK0 236 aa10.28□□□□□ -0.76
PHGDH-219ENST00000641513 NID2Q14112 1375 aa10.27□□□□□ -0.76
PHGDH-219ENST00000641513 GREB1LQ9C091 1923 aaPredicted RBP10.27□□□□□ -0.76
PHGDH-219ENST00000641513 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 TCP10L2B9ZVM9 353 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 MPHOSPH10O00566 681 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 RCAN1P53805 252 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 EIF6P56537 245 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 KRT85P78386 507 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 GNL2Q13823 731 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 OTUD7BQ6GQQ9 843 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 CAVIN1Q6NZI2 390 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 ARHGAP27Q6ZUM4 889 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 ZFPM1Q8IX07 1006 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 CMTR1Q8N1G2 835 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 AGBL3Q8NEM8 1001 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 WASF1Q92558 559 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 TRIM44Q96DX7 344 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 IL17RBQ9NRM6 502 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 RBM28Q9NW13 759 aaKnown RBP10.27□□□□□ -0.77
PHGDH-219ENST00000641513 SWAP70Q9UH65 585 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 GJA3Q9Y6H8 435 aa10.27□□□□□ -0.77
PHGDH-219ENST00000641513 ESPNB1AK53 854 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 MYO1BO43795 1136 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 IFNAR1P17181 557 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 RESTQ13127 1097 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 PPP2R5BQ15173 497 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 FAM173BQ6P4H8 233 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 USP48Q86UV5 1035 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 PNMA1Q8ND90 353 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 NEDD1Q8NHV4 660 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 AIFM3Q96NN9 605 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 GMLQ99445 158 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 IDI2Q9BXS1 227 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 FHDC1Q9C0D6 1143 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-219ENST00000641513 DHX36Q9H2U1 1008 aaKnown RBP10.26□□□□□ -0.77
PHGDH-219ENST00000641513 TCP11L1Q9NUJ3 509 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
PHGDH-219ENST00000641513 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
PHGDH-219ENST00000641513 DDTLA6NHG4 134 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-219ENST00000641513 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 ENTPD3O75355 529 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 PLEKHA8P1O95397 391 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 DEXIO95424 95 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 AKR1B1P15121 316 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 KIF5BP33176 963 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 UBE2HP62256 183 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 NTRK3Q16288 839 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 UVSSAQ2YD98 709 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
PHGDH-219ENST00000641513 RCSD1Q6JBY9 416 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 POTEHQ6S545 545 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 PIBF1Q8WXW3 757 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-219ENST00000641513 TMEM63CQ9P1W3 806 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 TFIP11Q9UBB9 837 aaKnown RBP10.25□□□□□ -0.77
PHGDH-219ENST00000641513 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 ZNF70Q9UC06 446 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-219ENST00000641513 ELP1O95163 1332 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 LTBP3Q9NS15 1303 aa10.25□□□□□ -0.77
PHGDH-219ENST00000641513 NPM3O75607 178 aaKnown RBP10.24□□□□□ -0.77
PHGDH-219ENST00000641513 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
PHGDH-219ENST00000641513 SHMT1P34896 483 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
PHGDH-219ENST00000641513 GABPAQ06546 454 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 TROAPQ12815 778 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 SAFBQ15424 915 aaKnown RBP eCLIP10.24□□□□□ -0.77
PHGDH-219ENST00000641513 KRT40Q6A162 431 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 FBXO18Q8NFZ0 1043 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 ANKS1AQ92625 1134 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 ZNF396Q96N95 335 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-219ENST00000641513 EHD4Q9H223 541 aa10.24□□□□□ -0.77
PHGDH-219ENST00000641513 GJB4Q9NTQ9 266 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms