RNA–Protein interactions for RNA: ENST00000641431.1

SAMMSON-215, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,046 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-215ENST00000641431 KIAA1683Q9H0B3 1180 aa18.7■□□□□ 0.58
SAMMSON-215ENST00000641431 C1orf115Q9H7X2 142 aa18.7■□□□□ 0.58
SAMMSON-215ENST00000641431 TLR7Q9NYK1 1049 aaKnown RBP18.7■□□□□ 0.58
SAMMSON-215ENST00000641431 COL6A1P12109 1028 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 MAGEA10P43363 369 aaPredicted RBP18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 ABCB5Q2M3G0 1257 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 LRIT3Q3SXY7 679 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 CERKLQ49MI3 558 aaPredicted RBP18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 LHX8Q68G74 356 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 CABP5Q9NP86 173 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 SIPA1L1O43166 1804 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 DOCK3Q8IZD9 2030 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 PFASO15067 1338 aa18.69■□□□□ 0.58
SAMMSON-215ENST00000641431 SYN1P17600 705 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 CCL14Q16627 93 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 MFSD14CQ5VZR4 134 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 LBX2Q6XYB7 198 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 CATSPERGQ6ZRH7 1159 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 TDHQ8IZJ6 230 aa18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
SAMMSON-215ENST00000641431 SLC15A5A6NIM6 579 aa18.67■□□□□ 0.58
SAMMSON-215ENST00000641431 VCAM1P19320 739 aa18.67■□□□□ 0.58
SAMMSON-215ENST00000641431 CCND3P30281 292 aaPredicted RBP18.67■□□□□ 0.58
SAMMSON-215ENST00000641431 UBE2OQ9C0C9 1292 aaKnown RBP18.67■□□□□ 0.58
SAMMSON-215ENST00000641431 IVNS1ABPQ9Y6Y0 642 aa18.67■□□□□ 0.58
SAMMSON-215ENST00000641431 MSCO60682 206 aa18.66■□□□□ 0.58
SAMMSON-215ENST00000641431 CNMDO75829 334 aa18.66■□□□□ 0.58
SAMMSON-215ENST00000641431 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
SAMMSON-215ENST00000641431 COL6A3P12111 3177 aa18.66■□□□□ 0.58
SAMMSON-215ENST00000641431 PLXNB2O15031 1838 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 HOXC6P09630 235 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 PTPREP23469 700 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 HSP90AB4PQ58FF6 505 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 WDR78Q5VTH9 848 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 AACSQ86V21 672 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 DEFB123Q8N688 67 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
SAMMSON-215ENST00000641431 DDX60LQ5H9U9 1706 aaKnown RBP18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 MAGEB6P1A0A0J9YX57 407 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 POLR3DP05423 398 aaPredicted RBP18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 RLBP1P12271 317 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 SHMT1P34896 483 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 CEP85Q6P2H3 762 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 RIOK1Q9BRS2 568 aaKnown RBP18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 NDUFB9Q9Y6M9 179 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 FOCADQ5VW36 1801 aa18.64■□□□□ 0.57
SAMMSON-215ENST00000641431 PLCD1P51178 756 aa18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 GRB14Q14449 540 aa18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 LRRC26Q2I0M4 334 aa18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 CRNKL1Q9BZJ0 848 aaKnown RBP18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 RPAP3Q9H6T3 665 aaPredicted RBP18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 HOXC10Q9NYD6 342 aa18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 DDX20Q9UHI6 824 aaKnown RBP18.63■□□□□ 0.57
SAMMSON-215ENST00000641431 SPDYE16A6NNV3 312 aaPredicted RBP18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 DLL1O00548 723 aa18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 GABPAQ06546 454 aa18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 SLC9C2Q5TAH2 1124 aa18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 BTBD7Q9P203 1132 aa18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 EXOC6BQ9Y2D4 811 aa18.62■□□□□ 0.57
SAMMSON-215ENST00000641431 CUL9Q8IWT3 2517 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 ALPK3Q96L96 1907 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 STRNO43815 780 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 COG2Q14746 738 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 SEPT2Q15019 361 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 LPAR1Q92633 364 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 MCM9Q9NXL9 1143 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 FLRT1Q9NZU1 646 aa18.61■□□□□ 0.57
SAMMSON-215ENST00000641431 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 PDE6AP16499 860 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 CNGA1P29973 690 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 DPP9Q86TI2 863 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 SENP6Q9GZR1 1112 aaPredicted RBP18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 STXBP5LQ9Y2K9 1186 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 CDK5RAP2Q96SN8 1893 aa18.6■□□□□ 0.57
SAMMSON-215ENST00000641431 DNM1LO00429 736 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 OLFML2BQ68BL8 750 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 CLASRPQ8N2M8 674 aaKnown RBP18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 SHCBP1Q8NEM2 672 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 LBHD1Q9BQE6 289 aaPredicted RBP18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 TANGO6Q9C0B7 1094 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 SLC5A4Q9NY91 659 aa18.59■□□□□ 0.57
SAMMSON-215ENST00000641431 IGHA2P01877 340 aa18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 CYP2C19P33261 490 aa18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 TMEM179Q6ZVK1 233 aa18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 Q7L0L9 218 aa18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 ARRDC4Q8NCT1 418 aa18.58■□□□□ 0.56
SAMMSON-215ENST00000641431 NPLOC4Q8TAT6 608 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms