RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 FOXP1Q9H334 677 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-208ENST00000641023 STX8Q9UNK0 236 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 CLIC4Q9Y696 253 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 V9GY48 417 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-208ENST00000641023 DDX60LQ5H9U9 1706 aaKnown RBP19.98■□□□□ 0.79
PHGDH-208ENST00000641023 DIS3L2Q8IYB7 885 aaKnown RBP19.98■□□□□ 0.79
PHGDH-208ENST00000641023 NEDD1Q8NHV4 660 aa19.98■□□□□ 0.79
PHGDH-208ENST00000641023 SPTLC2O15270 562 aa19.97■□□□□ 0.79
PHGDH-208ENST00000641023 ADALQ6DHV7 355 aa19.97■□□□□ 0.79
PHGDH-208ENST00000641023 NOSTRINQ8IVI9 506 aa19.97■□□□□ 0.79
PHGDH-208ENST00000641023 KCNJ14Q9UNX9 436 aa19.97■□□□□ 0.79
PHGDH-208ENST00000641023 MYH1P12882 1939 aa19.97■□□□□ 0.79
PHGDH-208ENST00000641023 PKN1Q16512 942 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 CCAR1Q8IX12 1150 aaKnown RBP19.96■□□□□ 0.79
PHGDH-208ENST00000641023 DDX4Q9NQI0 724 aaKnown RBP19.96■□□□□ 0.79
PHGDH-208ENST00000641023 PCDHA7Q9UN72 937 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 BTBD18B2RXH4 712 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 NR1I2O75469 434 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 DPEP1P16444 411 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 GNAQP50148 359 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 RBM5P52756 815 aaKnown RBP eCLIP19.96■□□□□ 0.79
PHGDH-208ENST00000641023 CCDC73Q6ZRK6 1079 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 SRBD1Q8N5C6 995 aaKnown RBP19.96■□□□□ 0.79
PHGDH-208ENST00000641023 PSMD1Q99460 953 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 OSBPL5Q9H0X9 879 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-208ENST00000641023 TNMDQ9H2S6 317 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 SERPINA10Q9UK55 444 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 FOCADQ5VW36 1801 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 ECM29Q5VYK3 1845 aa19.96■□□□□ 0.79
PHGDH-208ENST00000641023 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 SWAP70Q9UH65 585 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 SERPINB13Q9UIV8 391 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 CNTNAP5Q8WYK1 1306 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 HLA-DOAP06340 250 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 KCNA3P22001 575 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 GABPAQ06546 454 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 SLC39A14Q15043 492 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 TMEM47Q9BQJ4 181 aa19.95■□□□□ 0.78
PHGDH-208ENST00000641023 A0A1W2PQ27 194 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 A0A1W2PQ64 194 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 A0A1W2PQD8 194 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 CAMK4Q16566 473 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 JMYQ8N9B5 988 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 CLSTN2Q9H4D0 955 aa19.94■□□□□ 0.78
PHGDH-208ENST00000641023 GRM4Q14833 912 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 RILPL1Q5EBL4 403 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 VPS54Q9P1Q0 977 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 MRPS27Q92552 414 aaKnown RBP19.93■□□□□ 0.78
PHGDH-208ENST00000641023 PHF20Q9BVI0 1012 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 BRMS1Q9HCU9 246 aa19.93■□□□□ 0.78
PHGDH-208ENST00000641023 GOLGB1Q14789 3259 aaKnown RBP19.93■□□□□ 0.78
PHGDH-208ENST00000641023 SCN9AQ15858 1988 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 hCG_1642624A0A1W2PR95 340 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 PPP6R2O75170 966 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 CCDC192P0DO97 292 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 TGFB2P61812 414 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 FAM160A1Q05DH4 1040 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 VPS33BQ9H267 617 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 DHX36Q9H2U1 1008 aaKnown RBP19.92■□□□□ 0.78
PHGDH-208ENST00000641023 MYO3BQ8WXR4 1341 aa19.92■□□□□ 0.78
PHGDH-208ENST00000641023 TOP1P11387 765 aaKnown RBP19.91■□□□□ 0.78
PHGDH-208ENST00000641023 SCG2P13521 617 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 POLD1P28340 1107 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 NFIAQ12857 509 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 FSIP1Q8NA03 581 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 RNF214Q8ND24 703 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 CEP95Q96GE4 821 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 LZTS2Q9BRK4 669 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 FUCA2Q9BTY2 467 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 IDI2Q9BXS1 227 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 MAD2L2Q9UI95 211 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 MYH6P13533 1939 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 YDJCA8MPS7 323 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 ZBTB7AO95365 584 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 KRT2P35908 639 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-208ENST00000641023 LARGE2Q8N3Y3 721 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.91■□□□□ 0.78
PHGDH-208ENST00000641023 PIM2Q9P1W9 311 aa19.91■□□□□ 0.78
PHGDH-208ENST00000641023 CTAGE5O15320 804 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 KINO60870 393 aaKnown RBP19.9■□□□□ 0.78
PHGDH-208ENST00000641023 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
PHGDH-208ENST00000641023 NOVP48745 357 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 NR5A1Q13285 461 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 SNW1Q13573 536 aaKnown RBP19.9■□□□□ 0.78
PHGDH-208ENST00000641023 RBM43Q6ZSC3 357 aaKnown RBP19.9■□□□□ 0.78
PHGDH-208ENST00000641023 EHD4Q9H223 541 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 GOLPH3LQ9H4A5 285 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 PTPAQ15257 358 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 STAG2Q8N3U4 1231 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 ENGASEQ8NFI3 743 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 MTFR1LQ9H019 292 aa19.9■□□□□ 0.78
PHGDH-208ENST00000641023 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-208ENST00000641023 OXER1Q8TDS5 423 aa19.89■□□□□ 0.77
PHGDH-208ENST00000641023 MARCKSP29966 332 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-208ENST00000641023 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 CKAP2LQ8IYA6 745 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms