RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 PRMT6Q96LA8 375 aaPredicted RBP24.74■■□□□ 1.55
SPIN3-244ENST00000640728 EHD4Q9H223 541 aa24.74■■□□□ 1.55
SPIN3-244ENST00000640728 DHX36Q9H2U1 1008 aaKnown RBP24.74■■□□□ 1.55
SPIN3-244ENST00000640728 RBM27Q9P2N5 1060 aaKnown RBP24.74■■□□□ 1.55
SPIN3-244ENST00000640728 PRPF3O43395 683 aaKnown RBP24.74■■□□□ 1.55
SPIN3-244ENST00000640728 TRIM29Q14134 588 aa24.74■■□□□ 1.55
SPIN3-244ENST00000640728 ZNF396Q96N95 335 aaPredicted RBP24.74■■□□□ 1.55
SPIN3-244ENST00000640728 TMEM47Q9BQJ4 181 aa24.74■■□□□ 1.55
SPIN3-244ENST00000640728 TMEM63CQ9P1W3 806 aa24.74■■□□□ 1.55
SPIN3-244ENST00000640728 KIF28PB7ZC32 967 aa24.73■■□□□ 1.55
SPIN3-244ENST00000640728 NFKBIEO00221 500 aa24.73■■□□□ 1.55
SPIN3-244ENST00000640728 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.73■■□□□ 1.55
SPIN3-244ENST00000640728 TDRD3Q9H7E2 651 aaKnown RBP24.73■■□□□ 1.55
SPIN3-244ENST00000640728 STX8Q9UNK0 236 aa24.73■■□□□ 1.55
SPIN3-244ENST00000640728 KIF5BP33176 963 aa24.73■■□□□ 1.55
SPIN3-244ENST00000640728 SRBD1Q8N5C6 995 aaKnown RBP24.73■■□□□ 1.55
SPIN3-244ENST00000640728 BCS1LQ9Y276 419 aa24.73■■□□□ 1.55
SPIN3-244ENST00000640728 ZBTB12Q9Y330 459 aaPredicted RBP24.73■■□□□ 1.55
SPIN3-244ENST00000640728 PLIN4Q96Q06 1357 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 PSME4Q14997 1843 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 SHMT1P34896 483 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 AKAP17AQ02040 695 aaKnown RBP24.72■■□□□ 1.55
SPIN3-244ENST00000640728 CXCL9Q07325 125 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 TCP10Q12799 353 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 PKN1Q16512 942 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 AGBL3Q8NEM8 1001 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 RCOR1Q9UKL0 485 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 HDAC9Q9UKV0 1011 aa24.72■■□□□ 1.55
SPIN3-244ENST00000640728 ZSCAN23Q3MJ62 389 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 SH3BP5LQ7L8J4 393 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 CEP95Q96GE4 821 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 USP28Q96RU2 1077 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 V9GY48 417 aaPredicted RBP24.71■■□□□ 1.55
SPIN3-244ENST00000640728 BRCA1P38398 1863 aaKnown RBP24.71■■□□□ 1.55
SPIN3-244ENST00000640728 DDTLA6NHG4 134 aaPredicted RBP24.71■■□□□ 1.55
SPIN3-244ENST00000640728 SPDYE2BA6NHP3 402 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 SPDYE6P0CI01 402 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 GRM4Q14833 912 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 OGFOD1Q8N543 542 aa24.71■■□□□ 1.55
SPIN3-244ENST00000640728 ENTPD3O75355 529 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 AKR1B1P15121 316 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 U2AF2P26368 475 aaKnown RBP eCLIP24.7■■□□□ 1.548e-6■■■■□ 19.7
SPIN3-244ENST00000640728 MYSM1Q5VVJ2 828 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 JDP2Q8WYK2 163 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 PI4KBQ9UBF8 816 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 TAOK2Q9UL54 1235 aa24.7■■□□□ 1.54
SPIN3-244ENST00000640728 IGKV6D-41A0A0C4DH26 115 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 FSD2A1L4K1 749 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 ECM29Q5VYK3 1845 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 CNTNAP5Q8WYK1 1306 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 FTOQ9C0B1 505 aaKnown RBP eCLIP24.69■■□□□ 1.54
SPIN3-244ENST00000640728 MMP1P03956 469 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 TOP1P11387 765 aaKnown RBP24.69■■□□□ 1.54
SPIN3-244ENST00000640728 MTMR4Q9NYA4 1195 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 RTEL1Q9NZ71 1219 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 MAD2L2Q9UI95 211 aa24.69■■□□□ 1.54
SPIN3-244ENST00000640728 LTBP3Q9NS15 1303 aa24.68■■□□□ 1.54
SPIN3-244ENST00000640728 ZNF445P59923 1031 aa24.68■■□□□ 1.54
SPIN3-244ENST00000640728 CEBPZQ03701 1054 aaKnown RBP24.68■■□□□ 1.54
SPIN3-244ENST00000640728 DLGAP5Q15398 846 aa24.68■■□□□ 1.54
SPIN3-244ENST00000640728 DNAJC18Q9H819 358 aa24.68■■□□□ 1.54
SPIN3-244ENST00000640728 FER1L6Q2WGJ9 1857 aa24.68■■□□□ 1.54
SPIN3-244ENST00000640728 GNAQP50148 359 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 CIAPIN1Q6FI81 312 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 FOXP4Q8IVH2 680 aaPredicted RBP24.67■■□□□ 1.54
SPIN3-244ENST00000640728 SYAP1Q96A49 352 aaPredicted RBP24.67■■□□□ 1.54
SPIN3-244ENST00000640728 PGBD1Q96JS3 809 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 KCNJ14Q9UNX9 436 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 TPRNQ4KMQ1 711 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 ZSCAN29Q8IWY8 852 aaPredicted RBP24.67■■□□□ 1.54
SPIN3-244ENST00000640728 STAG2Q8N3U4 1231 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 MTMR14Q8NCE2 650 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 NLGN2Q8NFZ4 835 aa24.67■■□□□ 1.54
SPIN3-244ENST00000640728 GOLGB1Q14789 3259 aaKnown RBP24.67■■□□□ 1.54
SPIN3-244ENST00000640728 ATRNL1Q5VV63 1379 aa24.66■■□□□ 1.54
SPIN3-244ENST00000640728 hCG_1642624A0A1W2PR95 340 aa24.66■■□□□ 1.54
SPIN3-244ENST00000640728 PALM3A6NDB9 673 aaPredicted RBP24.66■■□□□ 1.54
SPIN3-244ENST00000640728 SAFBQ15424 915 aaKnown RBP eCLIP24.66■■□□□ 1.54
SPIN3-244ENST00000640728 METTL16Q86W50 562 aaKnown RBP24.66■■□□□ 1.54
SPIN3-244ENST00000640728 SHISA4Q96DD7 197 aa24.66■■□□□ 1.54
SPIN3-244ENST00000640728 CCDC17Q96LX7 622 aa24.66■■□□□ 1.54
SPIN3-244ENST00000640728 GOLGA6L3A6NEY3 463 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 SLURP2P0DP57 97 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 XBP1P17861 261 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 GAS2L3Q86XJ1 694 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 POLR3EQ9NVU0 708 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 ZNF70Q9UC06 446 aaPredicted RBP24.65■■□□□ 1.54
SPIN3-244ENST00000640728 ISY1Q9ULR0 285 aaKnown RBP24.65■■□□□ 1.54
SPIN3-244ENST00000640728 GNL2Q13823 731 aaKnown RBP24.65■■□□□ 1.54
SPIN3-244ENST00000640728 DIS3L2Q8IYB7 885 aaKnown RBP24.65■■□□□ 1.54
SPIN3-244ENST00000640728 FOXP1Q9H334 677 aaPredicted RBP24.65■■□□□ 1.54
SPIN3-244ENST00000640728 TMOD2Q9NZR1 351 aa24.65■■□□□ 1.54
SPIN3-244ENST00000640728 COL2A1P02458 1487 aaPredicted RBP24.64■■□□□ 1.54
SPIN3-244ENST00000640728 GOLGA6L4A6NEF3 574 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 BTBD18B2RXH4 712 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 TNIP1Q15025 636 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 LZTS2Q9BRK4 669 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 VPS54Q9P1Q0 977 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 CLIC4Q9Y696 253 aa24.64■■□□□ 1.54
SPIN3-244ENST00000640728 NASPP49321 788 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms