RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 SATB1Q01826 763 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 MORC3Q14149 939 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 SETDB1Q15047 1291 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 E2F4Q16254 413 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 CCDC40Q4G0X9 1142 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 BEND6Q5SZJ8 279 aaPredicted RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 MPRIPQ6WCQ1 1025 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 TAOK1Q7L7X3 1001 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 NELFBQ8WX92 580 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 RAB3IPQ96QF0 476 aaPredicted RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 JPH2Q9BR39 696 aaPredicted RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 PLVAPQ9BX97 442 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 FAM53CQ9NYF3 392 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 COL3A1P02461 1466 aaPredicted RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 EYA2O00167 538 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 RNMTO43148 476 aaKnown RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 HSPD1P10809 573 aaKnown RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 HOXC9P31274 260 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 CASP14P31944 242 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 LMBR1LQ6UX01 489 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 RASGRP2Q7LDG7 609 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 THEMISQ8N1K5 641 aaPredicted RBP5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 RWDD2AQ9UIY3 292 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 L1RE1Q9UN81 338 aa5.6□□□□□ -1.51
HNRNPU-230ENST00000640657 ABCC3O15438 1527 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 ARHGEF40Q8TER5 1519 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 IGSF1Q8N6C5 1336 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 MACROD2A1Z1Q3 448 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 MEFVO15553 781 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 ACTN4O43707 911 aaKnown RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 FLOT1O75955 427 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 RAPGEF3O95398 923 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 IBSPP21815 317 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 ALDH3A1P30838 453 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 NOP2P46087 812 aaKnown RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 BIRC3Q13489 604 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 GCKRQ14397 625 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 CWF19L2Q2TBE0 894 aaKnown RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 CNNM4Q6P4Q7 775 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 COPS6Q7L5N1 327 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 APLFQ8IW19 511 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 N4BP2L2Q92802 583 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 DBNDD2Q9BQY9 259 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 NOC4LQ9BVI4 516 aaKnown RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TRIM6Q9C030 488 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 GOPCQ9HD26 462 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 PARP2Q9UGN5 583 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 SUFUQ9UMX1 484 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 MAP2K7O14733 419 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 EIF3HO15372 352 aaKnown RBP eCLIP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 NDUFA10O95299 355 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 ATP1A3P13637 1013 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 SEPT2Q15019 361 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 SLC9C1Q4G0N8 1177 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 OTUD7BQ6GQQ9 843 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TOGARAM2Q6ZUX3 1019 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 SYCE1Q8N0S2 351 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 PPFIBP2Q8ND30 876 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 IP6K1Q92551 441 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TBC1D31Q96DN5 1066 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TEX13AQ9BXU3 409 aaPredicted RBP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TAB2Q9NYJ8 693 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 RIPOR2Q9Y4F9 1068 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 TULP4Q9NRJ4 1543 aa5.59□□□□□ -1.51
HNRNPU-230ENST00000640657 ATP2C2O75185 946 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 RASSF2P50749 326 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 TMED8Q6PL24 325 aaPredicted RBP5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 DTHD1Q6ZMT9 781 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC63Q8NA47 563 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC197Q8NCU1 140 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 IFIH1Q9BYX4 1025 aaKnown RBP5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC113Q9H0I3 377 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 RAB17Q9H0T7 212 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 MMRN2Q9H8L6 949 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 SNRKQ9NRH2 765 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 UTP11Q9Y3A2 253 aaKnown RBP5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 SRPRBQ9Y5M8 271 aaKnown RBP5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 MLH3Q9UHC1 1453 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 NEXMIFQ5QGS0 1516 aa5.59□□□□□ -1.52
HNRNPU-230ENST00000640657 CFAP73A6NFT4 308 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 SOWAHDA6NJG2 315 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 CPP00450 1065 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 NEFHP12036 1026 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 ELF1P32519 619 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 TRAPPC10P48553 1259 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 GYS2P54840 703 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 EIF3BP55884 814 aaKnown RBP5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 CCDC6Q16204 474 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 LRRC31Q6UY01 552 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 CHST3Q7LGC8 479 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 TRMT44Q8IYL2 757 aaKnown RBP5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 ARMC2Q8NEN0 867 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 UBLCP1Q8WVY7 318 aaPredicted RBP5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 WDR24Q96S15 920 aa5.58□□□□□ -1.52
HNRNPU-230ENST00000640657 CUEDC2Q9H467 287 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms