RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 DYNLL2Q96FJ2 89 aa30.3■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L15C9J2P7 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L13C9JLJ4 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L12C9JPN9 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L11C9JVI0 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L21D6R901 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L18D6R9N7 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L22D6RA61 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L17D6RBQ6 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L19D6RCP7 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L20D6RJB6 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 RNF113AO15541 343 aaKnown RBP30.29■■■□□ 2.44
VEGFA-232ENST00000640653 GLRX3O76003 335 aaKnown RBP30.29■■■□□ 2.44
VEGFA-232ENST00000640653 GUCY1A2P33402 732 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 USP17L24Q0WX57 530 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 MTFR1Q15390 333 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 TMEM179Q6ZVK1 233 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 SLC44A5Q8NCS7 719 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 PXYLP1Q8TE99 480 aa30.29■■■□□ 2.44
VEGFA-232ENST00000640653 AAMPQ13685 434 aa30.28■■■□□ 2.44
VEGFA-232ENST00000640653 GPRC5AQ8NFJ5 357 aa30.28■■■□□ 2.44
VEGFA-232ENST00000640653 GCC1Q96CN9 775 aa30.27■■■□□ 2.44
VEGFA-232ENST00000640653 STRBPQ96SI9 672 aaKnown RBP30.27■■■□□ 2.44
VEGFA-232ENST00000640653 ARPP21Q9UBL0 812 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-232ENST00000640653 CYP2D7A0A087X1C5 515 aa30.26■■■□□ 2.43
VEGFA-232ENST00000640653 VCAM1P19320 739 aa30.26■■■□□ 2.43
VEGFA-232ENST00000640653 MX1P20591 662 aa30.26■■■□□ 2.43
VEGFA-232ENST00000640653 HDAC1Q13547 482 aaPredicted RBP30.26■■■□□ 2.43
VEGFA-232ENST00000640653 PI4K2BQ8TCG2 481 aa30.26■■■□□ 2.43
VEGFA-232ENST00000640653 CCDC17Q96LX7 622 aa30.26■■■□□ 2.43
VEGFA-232ENST00000640653 BRCA2P51587 3418 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 CCL5P13501 91 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 CDK8P49336 464 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 ANKRD45Q5TZF3 282 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 GIMAP6Q6P9H5 292 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 CTR9Q6PD62 1173 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 C16orf86Q6ZW13 317 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 NKX2-3Q8TAU0 364 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 OTUD7AQ8TE49 926 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-232ENST00000640653 OSBP2Q969R2 916 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 TXNRD2Q9NNW7 524 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 RBPJLQ9UBG7 517 aa30.25■■■□□ 2.43
VEGFA-232ENST00000640653 BAZ2AQ9UIF9 1905 aaKnown RBP30.24■■■□□ 2.43
VEGFA-232ENST00000640653 ELNP15502 786 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 ERVK-9P63128 1117 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 ERVK-24P63145 666 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 PRPF38BQ5VTL8 546 aaKnown RBP30.24■■■□□ 2.43
VEGFA-232ENST00000640653 CATSPERGQ6ZRH7 1159 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 PAGR1Q9BTK6 254 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 RNF208Q9H0X6 261 aa30.24■■■□□ 2.43
VEGFA-232ENST00000640653 AKR1B1P15121 316 aa30.23■■■□□ 2.43
VEGFA-232ENST00000640653 CCAR1Q8IX12 1150 aaKnown RBP30.23■■■□□ 2.43
VEGFA-232ENST00000640653 RPAP3Q9H6T3 665 aaPredicted RBP30.23■■■□□ 2.43
VEGFA-232ENST00000640653 KIAA0100Q14667 2235 aaKnown RBP30.22■■■□□ 2.43
VEGFA-232ENST00000640653 INHAP05111 366 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 GNAT2P19087 354 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 MAPK4P31152 587 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 ARHGEF10LQ9HCE6 1279 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 GJD2Q9UKL4 321 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 RABGAP1Q9Y3P9 1069 aa30.22■■■□□ 2.43
VEGFA-232ENST00000640653 A0A1W2PRG0 241 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 GSG1L2A8MUP6 293 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 GPAA1O43292 621 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 PEX10O60683 326 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 GJB1P08034 283 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 ICA1Q05084 483 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 SBK1Q52WX2 424 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 FSD1Q9BTV5 496 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 SH2D4AQ9H788 454 aa30.21■■■□□ 2.43
VEGFA-232ENST00000640653 SMIM22K7EJ46 135 aa30.2■■■□□ 2.43
VEGFA-232ENST00000640653 Q3C1V9 767 aa30.2■■■□□ 2.43
VEGFA-232ENST00000640653 MYH8P13535 1937 aa30.2■■■□□ 2.42
VEGFA-232ENST00000640653 SALL3Q9BXA9 1300 aa30.2■■■□□ 2.42
VEGFA-232ENST00000640653 GJA8P48165 433 aa30.19■■■□□ 2.42
VEGFA-232ENST00000640653 LBX2Q6XYB7 198 aa30.19■■■□□ 2.42
VEGFA-232ENST00000640653 SOCS4Q8WXH5 440 aa30.19■■■□□ 2.42
VEGFA-232ENST00000640653 UNC93B1Q9H1C4 597 aa30.19■■■□□ 2.42
VEGFA-232ENST00000640653 M0R2C6 588 aa30.18■■■□□ 2.42
VEGFA-232ENST00000640653 CCNA1P78396 465 aa30.18■■■□□ 2.42
VEGFA-232ENST00000640653 LPAR1Q92633 364 aa30.18■■■□□ 2.42
VEGFA-232ENST00000640653 NUDT12Q9BQG2 462 aa30.18■■■□□ 2.42
VEGFA-232ENST00000640653 CWC22Q9HCG8 908 aaKnown RBP30.18■■■□□ 2.42
VEGFA-232ENST00000640653 APPP05067 770 aa30.17■■■□□ 2.42
VEGFA-232ENST00000640653 TDO2P48775 406 aa30.17■■■□□ 2.42
VEGFA-232ENST00000640653 POTEEQ6S8J3 1075 aa30.17■■■□□ 2.42
VEGFA-232ENST00000640653 SHISA4Q96DD7 197 aa30.17■■■□□ 2.42
VEGFA-232ENST00000640653 TMX2Q9Y320 296 aa30.17■■■□□ 2.42
VEGFA-232ENST00000640653 MINDY4BA8MYZ0 360 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 HMGCRP04035 888 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 CLEC10AQ8IUN9 316 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 TANGO6Q9C0B7 1094 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 PORCNQ9H237 461 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 RWDD1Q9H446 243 aaPredicted RBP30.16■■■□□ 2.42
VEGFA-232ENST00000640653 KANSL2Q9H9L4 492 aa30.16■■■□□ 2.42
VEGFA-232ENST00000640653 PDE4DIPQ5VU43 2346 aa30.15■■■□□ 2.42
VEGFA-232ENST00000640653 SPDYE16A6NNV3 312 aaPredicted RBP30.15■■■□□ 2.42
VEGFA-232ENST00000640653 PATL2C9JE40 543 aaKnown RBP30.15■■■□□ 2.42
VEGFA-232ENST00000640653 CNMDO75829 334 aa30.15■■■□□ 2.42
VEGFA-232ENST00000640653 COG2Q14746 738 aa30.15■■■□□ 2.42
VEGFA-232ENST00000640653 GPR142Q7Z601 462 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms