RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 FANCLQ9NW38 375 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 EVPLQ92817 2033 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 SEMA3EO15041 775 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ZPR1O75312 459 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 IFNAR1P17181 557 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 NUP58Q9BVL2 599 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 CDCA7Q9BWT1 371 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 MROH7-TTC4A0A0A0MT08 1334 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 MCAMP43121 646 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 USP5P45974 858 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 KIF5AQ12840 1032 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ZNF654Q8IZM8 581 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 AGXT2Q9BYV1 514 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 G3V3G9 751 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 DCAF8Q5TAQ9 597 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 CNNM4Q6P4Q7 775 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ATG9AQ7Z3C6 839 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ANKRD18AQ8IVF6 992 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 CABLES1Q8TDN4 633 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 NYXQ9GZU5 481 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 LAD1O00515 517 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 KRT18P05783 430 aaKnown RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 MCM7P33993 719 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 MTIF2P46199 727 aaKnown RBP6.27□□□□□ -1.41
SCN3A-210ENST00000640652 WHAMMP3Q1A5X7 153 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 CCDC144BQ3MJ40 725 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 DTHD1Q6ZMT9 781 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 CABP5Q9NP86 173 aa6.27□□□□□ -1.41
SCN3A-210ENST00000640652 ERVV-1B6SEH8 477 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CAPN2P17655 700 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CCT6AP40227 531 aaKnown RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 PPARAQ07869 468 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 STOX1Q6ZVD7 989 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 SMARCC1Q92922 1105 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TSPY3P0CV98 308 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TSPY8P0CW00 308 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 PLCG2P16885 1265 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 PAFAH1B1P43034 410 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 FOXO4P98177 505 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 GALNT17Q6IS24 598 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CACNA2D4Q7Z3S7 1137 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CEP89Q96ST8 783 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CYP27B1O15528 508 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ANKRD2Q9GZV1 360 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 HOXA7P31268 230 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ATP6V1AP38606 617 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TERF2Q15554 542 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ALX1Q15699 326 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ZNF569Q5MCW4 686 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TANGO6Q9C0B7 1094 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 STRCP1A6NGW2 1772 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TOGARAM1Q9Y4F4 1720 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 NUTM2BA6NNL0 878 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 NUTM2EB1AL46 878 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 SEMA3FQ13275 785 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 FANCBQ8NB91 859 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CPLX3Q8WVH0 158 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 AXIN2Q9Y2T1 843 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 PNMA6AP0CW24 399 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 EEF1GP26641 437 aaKnown RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 SPATA1Q5VX52 437 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 GUCA1BQ9UMX6 200 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 KCNJ18B7U540 433 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CLCN6P51797 869 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 KCNJ12Q14500 433 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 IFI16Q16666 785 aaKnown RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 CCDC122Q5T0U0 273 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 FMNL3Q8IVF7 1028 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ENGASEQ8NFI3 743 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 STAG1Q8WVM7 1258 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 ARPP21Q9UBL0 812 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TCEAL9Q9UHQ7 104 aa6.26□□□□□ -1.41
SCN3A-210ENST00000640652 TACC1O75410 805 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 RFX5P48382 616 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CCZ1BP86790 482 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CCZ1P86791 482 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 MICALCLQ6ZW33 695 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ARMT1Q9H993 441 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 LY9Q9HBG7 655 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 OTUD7BQ6GQQ9 843 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CUEDC2Q9H467 287 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 AATFQ9NY61 560 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 SRPRBQ9Y5M8 271 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 A1BGP04217 495 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 OAS2P29728 719 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 ADKP55263 362 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 KMT5BQ4FZB7 885 aa6.25□□□□□ -1.41
SCN3A-210ENST00000640652 GIGYF2Q6Y7W6 1299 aaKnown RBP6.25□□□□□ -1.41
SCN3A-210ENST00000640652 CCDC42Q96M95 316 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms