RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 STK3Q13188 491 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 RRP1BQ14684 758 aaKnown RBP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 ME3Q16798 604 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 MAP1SQ66K74 1059 aaPredicted RBP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 SYNE3Q6ZMZ3 975 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 CDC37L1Q7L3B6 337 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 DGKHQ86XP1 1220 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 ZNF341Q9BYN7 854 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 GLIS2Q9BZE0 524 aaPredicted RBP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 SLKQ9H2G2 1235 aaPredicted RBP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
HLA-B-258ENST00000640615 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 STX8Q9UNK0 236 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 SLC12A7Q9Y666 1083 aa10.28□□□□□ -0.76
HLA-B-258ENST00000640615 GOLGA8BA8MQT2 603 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 LARGE1O95461 756 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 PDIA3P30101 505 aaKnown RBP10.27□□□□□ -0.77
HLA-B-258ENST00000640615 EVCP57679 992 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 PRKG1Q13976 671 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 RAB3GAP1Q15042 981 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
HLA-B-258ENST00000640615 RCSD1Q6JBY9 416 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 TMEM179Q6ZVK1 233 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 CATIPQ7Z7H3 387 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 SGMS1Q86VZ5 419 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 LDHDQ86WU2 507 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 TNS4Q8IZW8 715 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 CDCA5Q96FF9 252 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.77
HLA-B-258ENST00000640615 CEP95Q96GE4 821 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 KAT14Q9H8E8 782 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 MTMR4Q9NYA4 1195 aa10.27□□□□□ -0.77
HLA-B-258ENST00000640615 IGKV6D-41A0A0C4DH26 115 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 ZBTB43O43298 467 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 PFKFB2O60825 505 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 NF2P35240 595 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 CAP2P40123 477 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 CCT2P78371 535 aaKnown RBP10.26□□□□□ -0.77
HLA-B-258ENST00000640615 JAG1P78504 1218 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 SEPT2Q15019 361 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 PPP4R3BQ5MIZ7 849 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 CLEC10AQ8IUN9 316 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 NUP133Q8WUM0 1156 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 TMEM47Q9BQJ4 181 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 KANSL2Q9H9L4 492 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 ZBTB21Q9ULJ3 1066 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 FZD1Q9UP38 647 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 PLIN4Q96Q06 1357 aa10.26□□□□□ -0.77
HLA-B-258ENST00000640615 GOLGA8AA7E2F4 631 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 PPP1R12BO60237 982 aaPredicted RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 CTNND1O60716 968 aaKnown RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 USP2O75604 605 aaPredicted RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 TTLL1O95922 423 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 EEF2P13639 858 aaKnown RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 RXRAP19793 462 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 INPP5BP32019 993 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 GUCY1A2P33402 732 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 METAP2P50579 478 aaKnown RBP eCLIP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 ICA1Q05084 483 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 CUL4AQ13619 759 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 TTLL12Q14166 644 aaPredicted RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 APOA5Q6Q788 366 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 MICU3Q86XE3 530 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 CCDC144CPQ8IYA2 1237 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 WRNIP1Q96S55 665 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 NCOA5Q9HCD5 579 aaKnown RBP10.25□□□□□ -0.77
HLA-B-258ENST00000640615 ZNF112Q9UJU3 913 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 MTMR7Q9Y216 660 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 THSD7BQ9C0I4 1608 aa10.25□□□□□ -0.77
HLA-B-258ENST00000640615 SIPA1L1O43166 1804 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 TRAF5O00463 557 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 DDAH1O94760 285 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 ASNSP08243 561 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 CALM1P0DP23 149 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 CALM2P0DP24 149 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 CALM3P0DP25 149 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
HLA-B-258ENST00000640615 NOVP48745 357 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 SCRN1Q12765 414 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 RTN1Q16799 776 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 SCYL3Q8IZE3 742 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 LRRC47Q8N1G4 583 aaKnown RBP10.24□□□□□ -0.77
HLA-B-258ENST00000640615 GTF3C6Q969F1 213 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms