RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 CCL5P13501 91 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 ELNP15502 786 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 UBXN2AP68543 259 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 TXNRD2Q9NNW7 524 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 MORF4L1Q9UBU8 362 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
HNRNPU-229ENST00000640440 RLFQ13129 1914 aa17.33■□□□□ 0.37
HNRNPU-229ENST00000640440 PARP14Q460N5 1801 aa17.33■□□□□ 0.37
HNRNPU-229ENST00000640440 SMIM22K7EJ46 135 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 VCAM1P19320 739 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 USP14P54578 494 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 IRF5Q13568 498 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 KIAA1683Q9H0B3 1180 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 RNF208Q9H0X6 261 aa17.33■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L12C9JPN9 530 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L21D6R901 530 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 INHAP05111 366 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 PXYLP1Q8TE99 480 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 GTF3C2Q8WUA4 911 aaPredicted RBP17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 SHISA4Q96DD7 197 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 PAGR1Q9BTK6 254 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 UNC93B1Q9H1C4 597 aa17.32■□□□□ 0.36
HNRNPU-229ENST00000640440 MYH4Q9Y623 1939 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 TTC41PQ6P2S7 1318 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 AKR1B1P15121 316 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 ERVK-24P63145 666 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 C12orf60Q5U649 245 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 RBPJLQ9UBG7 517 aa17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 GREB1LQ9C091 1923 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-229ENST00000640440 RNF113AO15541 343 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 CDK8P49336 464 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 POTEEQ6S8J3 1075 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 APPBP2Q92624 585 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 STRBPQ96SI9 672 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 GJD2Q9UKL4 321 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 COL11A1P12107 1806 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 TRIOBPQ9H2D6 2365 aa17.3■□□□□ 0.36
HNRNPU-229ENST00000640440 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 ERC2O15083 957 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 GJB1P08034 283 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 Q3C1V9 767 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 C16orf86Q6ZW13 317 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
HNRNPU-229ENST00000640440 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 ZNFX1Q9P2E3 1918 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 M0R2C6 588 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 GLRX3O76003 335 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 MX1P20591 662 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 MAPK4P31152 587 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 GJA8P48165 433 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 ICA1Q05084 483 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 CCAR1Q8IX12 1150 aaKnown RBP17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 PORCNQ9H237 461 aa17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 ARPP21Q9UBL0 812 aaPredicted RBP17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
HNRNPU-229ENST00000640440 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 GPAA1O43292 621 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 CNMDO75829 334 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 HMGCRP04035 888 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 ANKRD45Q5TZF3 282 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 FSD1Q9BTV5 496 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
HNRNPU-229ENST00000640440 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 CYP2B6P20813 491 aa17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 HDAC1Q13547 482 aaPredicted RBP17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 GPR142Q7Z601 462 aa17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 STK11IPQ8N1F8 1099 aa17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 NUDT12Q9BQG2 462 aa17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms