RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ARID3AQ99856 593 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 RNF32Q9H0A6 362 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 C12orf49Q9H741 205 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 TJP2Q9UDY2 1190 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 TTF2Q9UNY4 1162 aaKnown RBP7.12□□□□□ -1.27
AP3S1-209ENST00000640413 PCDHB5Q9Y5E4 795 aa7.12□□□□□ -1.27
AP3S1-209ENST00000640413 HOXA5P20719 270 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 TPP2P29144 1249 aaPredicted RBP7.11□□□□□ -1.27
AP3S1-209ENST00000640413 SEPT6Q14141 434 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 SV2BQ7L1I2 683 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 PIWIL2Q8TC59 973 aaKnown RBP7.11□□□□□ -1.27
AP3S1-209ENST00000640413 C20orf173Q96LM9 149 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
AP3S1-209ENST00000640413 SP110Q9HB58 689 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 FAM8A1Q9UBU6 413 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
AP3S1-209ENST00000640413 GFRA2O00451 464 aa7.1□□□□□ -1.27
AP3S1-209ENST00000640413 GNEQ9Y223 722 aaKnown RBP7.1□□□□□ -1.27
AP3S1-209ENST00000640413 PGRP06401 933 aa7.09□□□□□ -1.27
AP3S1-209ENST00000640413 ATP2B2Q01814 1243 aa7.08□□□□□ -1.28
AP3S1-209ENST00000640413 GAB4Q2WGN9 574 aa7.08□□□□□ -1.28
AP3S1-209ENST00000640413 TIGD5Q53EQ6 642 aa7.08□□□□□ -1.28
AP3S1-209ENST00000640413 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
AP3S1-209ENST00000640413 TMEM87BQ96K49 555 aa7.08□□□□□ -1.28
AP3S1-209ENST00000640413 MCOLN1Q9GZU1 580 aa7.08□□□□□ -1.28
AP3S1-209ENST00000640413 ZGLP1P0C6A0 271 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 SRFP11831 508 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 ETV3P41162 512 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 EGR3Q06889 387 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 PDE4CQ08493 712 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 SLC6A19Q695T7 634 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 ZNF605Q86T29 641 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
AP3S1-209ENST00000640413 DNAJB8Q8NHS0 232 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 DUSP13Q9UII6 198 aa7.07□□□□□ -1.28
AP3S1-209ENST00000640413 MYOCOSA0A1B0GUC4 107 aa7.06□□□□□ -1.28
AP3S1-209ENST00000640413 LMNB1P20700 586 aa7.06□□□□□ -1.28
AP3S1-209ENST00000640413 C14orf37Q86TY3 774 aa7.06□□□□□ -1.28
AP3S1-209ENST00000640413 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
AP3S1-209ENST00000640413 TRIT1Q9H3H1 467 aaKnown RBP7.06□□□□□ -1.28
AP3S1-209ENST00000640413 CEP131Q9UPN4 1083 aa7.06□□□□□ -1.28
AP3S1-209ENST00000640413 BMP7P18075 431 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 DLG4P78352 724 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 CCDC85BQ15834 202 aaPredicted RBP7.05□□□□□ -1.28
AP3S1-209ENST00000640413 MAP3K11Q16584 847 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 ASB16Q96NS5 453 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 PARD6AQ9NPB6 346 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 GPATCH2Q9NW75 528 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 TACC3Q9Y6A5 838 aa7.05□□□□□ -1.28
AP3S1-209ENST00000640413 RPS26P62854 115 aaKnown RBP7.04□□□□□ -1.28
AP3S1-209ENST00000640413 TSPYL5Q86VY4 417 aaPredicted RBP7.04□□□□□ -1.28
AP3S1-209ENST00000640413 IRF2BP1Q8IU81 584 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 MCATQ8IVS2 390 aaKnown RBP7.04□□□□□ -1.28
AP3S1-209ENST00000640413 LILRA2Q8N149 483 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 BAHD1Q8TBE0 780 aaPredicted RBP7.04□□□□□ -1.28
AP3S1-209ENST00000640413 PPP1R13LQ8WUF5 828 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 RELTQ969Z4 430 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
AP3S1-209ENST00000640413 SGPP1Q9BX95 441 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 GPR62Q9BZJ7 368 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 SLC6A17Q9H1V8 727 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 PCDHA11Q9Y5I1 949 aa7.04□□□□□ -1.28
AP3S1-209ENST00000640413 LRRN2O75325 713 aa7.03□□□□□ -1.28
AP3S1-209ENST00000640413 LTKP29376 864 aa7.03□□□□□ -1.28
AP3S1-209ENST00000640413 OXR1Q8N573 874 aa7.03□□□□□ -1.28
AP3S1-209ENST00000640413 DTWD2Q8NBA8 298 aa7.03□□□□□ -1.28
AP3S1-209ENST00000640413 INTS4Q96HW7 963 aaKnown RBP7.03□□□□□ -1.28
AP3S1-209ENST00000640413 ZCCHC4Q9H5U6 513 aa7.03□□□□□ -1.28
AP3S1-209ENST00000640413 UPK3BL1B0FP48 263 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 UPK3BL2E5RIL1 263 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 P4HBP07237 508 aaKnown RBP7.02□□□□□ -1.29
AP3S1-209ENST00000640413 GALK1P51570 392 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 PDE4BQ07343 736 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 TMEM132EQ6IEE7 984 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
AP3S1-209ENST00000640413 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
AP3S1-209ENST00000640413 YBX2Q9Y2T7 364 aaKnown RBP7.02□□□□□ -1.29
AP3S1-209ENST00000640413 A0A0G2JLL6 359 aaPredicted RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 PEX10O60683 326 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 LDHBP07195 334 aaKnown RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 EIF4BP23588 611 aaKnown RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 PDE6BP35913 854 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 LIG3P49916 1009 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 JARID2Q92833 1246 aaPredicted RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 ZNF552Q9H707 407 aaPredicted RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 CWC22Q9HCG8 908 aaKnown RBP7.01□□□□□ -1.29
AP3S1-209ENST00000640413 GCM1Q9NP62 436 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 EBF1Q9UH73 591 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 GPR160Q9UJ42 338 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 KCNH3Q9ULD8 1083 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 CORINQ9Y5Q5 1042 aa7.01□□□□□ -1.29
AP3S1-209ENST00000640413 SEMA7AO75326 666 aa7□□□□□ -1.29
AP3S1-209ENST00000640413 BRD1O95696 1058 aa7□□□□□ -1.29
AP3S1-209ENST00000640413 TFE3P19532 575 aaPredicted RBP7□□□□□ -1.29
AP3S1-209ENST00000640413 NR0B2Q15466 257 aa7□□□□□ -1.29
AP3S1-209ENST00000640413 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms