RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 PRDM1O75626 825 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 CYP2D6P10635 497 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 HDLBPQ00341 1268 aaKnown RBP14.05□□□□□ -0.16
PAX6-258ENST00000639548 AKAP17AQ02040 695 aaKnown RBP14.05□□□□□ -0.16
PAX6-258ENST00000639548 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 NOSTRINQ8IVI9 506 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 CCAR1Q8IX12 1150 aaKnown RBP14.05□□□□□ -0.16
PAX6-258ENST00000639548 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 CTCFLQ8NI51 663 aaPredicted RBP14.05□□□□□ -0.16
PAX6-258ENST00000639548 NUP133Q8WUM0 1156 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 MRPS27Q92552 414 aaKnown RBP14.05□□□□□ -0.16
PAX6-258ENST00000639548 DAGLAQ9Y4D2 1042 aa14.05□□□□□ -0.16
PAX6-258ENST00000639548 FLT1P17948 1338 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 CNTNAP5Q8WYK1 1306 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
PAX6-258ENST00000639548 CMA1P23946 247 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 ME1P48163 572 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 NOVP48745 357 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 GNAQP50148 359 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 GTF2IP78347 998 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 SNW1Q13573 536 aaKnown RBP14.04□□□□□ -0.16
PAX6-258ENST00000639548 PKN1Q16512 942 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 FTOQ9C0B1 505 aaKnown RBP eCLIP14.04□□□□□ -0.16
PAX6-258ENST00000639548 CLIC4Q9Y696 253 aa14.04□□□□□ -0.16
PAX6-258ENST00000639548 RASA1P20936 1047 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 TFAP4Q01664 338 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 GNL2Q13823 731 aaKnown RBP14.03□□□□□ -0.16
PAX6-258ENST00000639548 PTPAQ15257 358 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 SF3A1Q15459 793 aaKnown RBP14.03□□□□□ -0.16
PAX6-258ENST00000639548 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 FMR1NBQ8N0W7 255 aaPredicted RBP14.03□□□□□ -0.16
PAX6-258ENST00000639548 ZNF444Q8N0Y2 327 aaPredicted RBP14.03□□□□□ -0.16
PAX6-258ENST00000639548 STK11IPQ8N1F8 1099 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 MKNK2Q9HBH9 465 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 IL17RBQ9NRM6 502 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 GJB4Q9NTQ9 266 aa14.03□□□□□ -0.16
PAX6-258ENST00000639548 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
PAX6-258ENST00000639548 SBF1O95248 1867 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.16
PAX6-258ENST00000639548 HSPA6P17066 643 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 SMARCA1P28370 1054 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 GUCY1A2P33402 732 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 CEBPZQ03701 1054 aaKnown RBP14.02□□□□□ -0.16
PAX6-258ENST00000639548 GRM4Q14833 912 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 FAM47AQ5JRC9 791 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 AXDND1Q5T1B0 1012 aaPredicted RBP14.02□□□□□ -0.16
PAX6-258ENST00000639548 STRIP1Q5VSL9 837 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 DIS3L2Q8IYB7 885 aaKnown RBP14.02□□□□□ -0.16
PAX6-258ENST00000639548 FSIP1Q8NA03 581 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 TIGD1Q96MW7 591 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 LZTS2Q9BRK4 669 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 KAT14Q9H8E8 782 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 SH3GLB2Q9NR46 395 aa14.02□□□□□ -0.16
PAX6-258ENST00000639548 SCN9AQ15858 1988 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 KINO60870 393 aaKnown RBP14.01□□□□□ -0.17
PAX6-258ENST00000639548 CUTAO60888 179 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 CDK8P49336 464 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 PLCD1P51178 756 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 EVX2Q03828 476 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 TYRO3Q06418 890 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 MAPKAPK5Q8IW41 473 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
PAX6-258ENST00000639548 CERS5Q8N5B7 392 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 TRIM44Q96DX7 344 aaPredicted RBP14.01□□□□□ -0.17
PAX6-258ENST00000639548 GOLPH3LQ9H4A5 285 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 CEP131Q9UPN4 1083 aa14.01□□□□□ -0.17
PAX6-258ENST00000639548 RIMBP2O15034 1052 aa14□□□□□ -0.17
PAX6-258ENST00000639548 BMP15O95972 392 aa14□□□□□ -0.17
PAX6-258ENST00000639548 GABPAQ06546 454 aa14□□□□□ -0.17
PAX6-258ENST00000639548 PNMA1Q8ND90 353 aa14□□□□□ -0.17
PAX6-258ENST00000639548 ZNF622Q969S3 477 aaKnown RBP eCLIP14□□□□□ -0.17
PAX6-258ENST00000639548 TEKT1Q969V4 418 aa14□□□□□ -0.17
PAX6-258ENST00000639548 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
PAX6-258ENST00000639548 SWAP70Q9UH65 585 aa14□□□□□ -0.17
PAX6-258ENST00000639548 MRVI1Q9Y6F6 885 aa14□□□□□ -0.17
PAX6-258ENST00000639548 BTBD18B2RXH4 712 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 NMT2O60551 498 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 TOMM70O94826 608 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 KRT2P35908 639 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 PFKFB3Q16875 520 aaPredicted RBP13.99□□□□□ -0.17
PAX6-258ENST00000639548 SASS6Q6UVJ0 657 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
PAX6-258ENST00000639548 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
PAX6-258ENST00000639548 RNF214Q8ND24 703 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 ZDHHC15Q96MV8 337 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 EHD4Q9H223 541 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 NMRK2Q9NPI5 230 aa13.99□□□□□ -0.17
PAX6-258ENST00000639548 TTF2Q9UNY4 1162 aaKnown RBP13.99□□□□□ -0.17
PAX6-258ENST00000639548 HPSEQ9Y251 543 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms