RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
SCARB2-215ENST00000639145 LMTK2Q8IWU2 1503 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 GSTTP1A0A1W2PQM5 241 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 MECOMQ03112 1051 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 OSBPL3Q9H4L5 887 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 UQCRHLA0A096LP55 91 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 UQCRHP07919 91 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 INF2Q27J81 1249 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 TBC1D7Q9P0N9 293 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 ADRA2BP18089 450 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 MCAMP43121 646 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 POLA2Q14181 598 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 ANKRD35Q8N283 1001 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
SCARB2-215ENST00000639145 SKILP12757 684 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 UBXN1Q04323 297 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 BIRC3Q13489 604 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 MYSM1Q5VVJ2 828 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 JADE2Q9NQC1 790 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 PCDHA1Q9Y5I3 950 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 PNPLA6Q8IY17 1366 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 GLG1Q92896 1179 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 AZI2Q9H6S1 392 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCARB2-215ENST00000639145 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 COA1Q9GZY4 146 aa15.31■□□□□ 0.04
SCARB2-215ENST00000639145 PTCH1Q13635 1447 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 CUTAO60888 179 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SLC27A3Q5K4L6 730 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 BLIDQ8IZY5 108 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SPATA31A6Q5VVP1 1343 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 RPL13P26373 211 aaKnown RBP15.3■□□□□ 0.04
SCARB2-215ENST00000639145 PDIA3P30101 505 aaKnown RBP15.3■□□□□ 0.04
SCARB2-215ENST00000639145 PRR16Q569H4 304 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 TPH2Q8IWU9 490 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-215ENST00000639145 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 GAS7O60861 476 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 ZNF202O95125 648 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SCG2P13521 617 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SLC16A2P36021 539 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 SMTNP53814 917 aa15.3■□□□□ 0.04
SCARB2-215ENST00000639145 KCTD1Q719H9 257 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 CCDC102AQ96A19 550 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-215ENST00000639145 GADD45BO75293 160 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-215ENST00000639145 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
SCARB2-215ENST00000639145 SNW1Q13573 536 aaKnown RBP15.29■□□□□ 0.04
SCARB2-215ENST00000639145 RAPGEF1Q13905 1077 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
SCARB2-215ENST00000639145 APOA5Q6Q788 366 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 PFKFB2O60825 505 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 CHRNA5P30532 468 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 MYL5Q02045 173 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 CD209Q9NNX6 404 aa15.29■□□□□ 0.04
SCARB2-215ENST00000639145 ADCY9O60503 1353 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARB2-215ENST00000639145 NEK11Q8NG66 645 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 USP28Q96RU2 1077 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 VPS16Q9H269 839 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 TBC1D10BQ4KMP7 808 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-215ENST00000639145 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 CCDC42Q96M95 316 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
SCARB2-215ENST00000639145 XRCC6P12956 609 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARB2-215ENST00000639145 GJC1P36383 396 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 R3HDM1Q15032 1099 aaKnown RBP15.28■□□□□ 0.04
SCARB2-215ENST00000639145 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 CABP7Q86V35 215 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
SCARB2-215ENST00000639145 KDM4FA0A1W2PPD8 638 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 AOC3Q16853 763 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.04
SCARB2-215ENST00000639145 CTNND2Q9UQB3 1225 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.04
SCARB2-215ENST00000639145 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 FRMD4BQ9Y2L6 1034 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 MRPL11Q9Y3B7 192 aaKnown RBP15.27■□□□□ 0.04
SCARB2-215ENST00000639145 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
SCARB2-215ENST00000639145 CNGA1P29973 690 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms