RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 UQCRFS1P1P0C7P4 283 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 SLURP2P0DP57 97 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 RARSP54136 660 aaKnown RBP6.76□□□□□ -1.33
PDE4D-229ENST00000638939 HMGCS2P54868 508 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 TIMM10P62072 90 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 CCDC84Q86UT8 332 aaPredicted RBP6.76□□□□□ -1.33
PDE4D-229ENST00000638939 OXER1Q8TDS5 423 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 SOCS4Q8WXH5 440 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 DEFB118Q96PH6 123 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 WDR18Q9BV38 432 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 ASCC2Q9H1I8 757 aaPredicted RBP6.76□□□□□ -1.33
PDE4D-229ENST00000638939 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
PDE4D-229ENST00000638939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
PDE4D-229ENST00000638939 AS3MTQ9HBK9 375 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 FLT1P17948 1338 aa6.76□□□□□ -1.33
PDE4D-229ENST00000638939 ASNSP08243 561 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 HOXA7P31268 230 aaPredicted RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 BMP8BP34820 402 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 MCAMP43121 646 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 BACE1P56817 501 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 SPP2Q13103 211 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 PTGDRQ13258 359 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 MAP3K21Q5TCX8 1036 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 GPR153Q6NV75 609 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 PI16Q6UXB8 463 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 NECAB2Q7Z6G3 386 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 TEX11Q8IYF3 940 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 GTF3C2Q8WUA4 911 aaPredicted RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 DDX12PQ92771 950 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 GDF15Q99988 308 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 GPCPD1Q9NPB8 672 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 GPR108Q9NPR9 543 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 PI4KBQ9UBF8 816 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
PDE4D-229ENST00000638939 RPTORQ8N122 1335 aa6.75□□□□□ -1.33
PDE4D-229ENST00000638939 SMCHD1A6NHR9 2005 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 PNMA6EA0A0J9YXQ4 647 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 BAG3O95817 575 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 TFRCP02786 760 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 GNAI2P04899 355 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 TRIM27P14373 513 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 HERVK_113P62684 666 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 IRX3P78415 501 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 MTMR2Q13614 643 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 RRP1BQ14684 758 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 GORABQ5T7V8 394 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 ATF7IPQ6VMQ6 1270 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 PDCD7Q8N8D1 485 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 SH3RF3Q8TEJ3 882 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 DIS3LQ8TF46 1054 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 TRIB2Q92519 343 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 PAWRQ96IZ0 340 aaKnown RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 ZNF512BQ96KM6 892 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 NEUROD6Q96NK8 337 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 DNAJC18Q9H819 358 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 HMX1Q9NP08 348 aaPredicted RBP6.74□□□□□ -1.33
PDE4D-229ENST00000638939 RAI14Q9P0K7 980 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 GJD2Q9UKL4 321 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 OGDHLQ9ULD0 1010 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 ZBTB21Q9ULJ3 1066 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 MCM3APO60318 1980 aa6.74□□□□□ -1.33
PDE4D-229ENST00000638939 C19orf81C9J6K1 198 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 SOX1O00570 391 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 IPO8O15397 1037 aaKnown RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 MAPK4P31152 587 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 ATN1P54259 1190 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 PPP4CP60510 307 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 IRX5P78411 483 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 NAA16Q6N069 864 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 TMED8Q6PL24 325 aaPredicted RBP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 TBC1D9Q6ZT07 1266 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 CERS3Q8IU89 383 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 APBA2Q99767 749 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 NBPF3Q9H094 633 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 AATFQ9NY61 560 aaKnown RBP eCLIP6.73□□□□□ -1.33
PDE4D-229ENST00000638939 TMOD4Q9NZQ9 345 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 LRP2BPQ9P2M1 347 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 PFASO15067 1338 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 LRRC37A2A6NM11 1700 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 GBF1Q92538 1859 aa6.73□□□□□ -1.33
PDE4D-229ENST00000638939 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 TRAK2O60296 914 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 SEC24BO95487 1268 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 OATP04181 439 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 HLA-DOAP06340 250 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 COL6A1P12109 1028 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 ZKSCAN1P17029 563 aaPredicted RBP6.72□□□□□ -1.33
PDE4D-229ENST00000638939 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 ERVK-24P63145 666 aa6.72□□□□□ -1.33
PDE4D-229ENST00000638939 G3BP1Q13283 466 aaKnown RBP eCLIP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms