RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.53□□□□□ -0.72
NECAP1-212ENST00000638787 TACC3Q9Y6A5 838 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-212ENST00000638787 BACE1P56817 501 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 PTH1RQ03431 593 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 SH3D19Q5HYK7 790 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 ANKRD23Q86SG2 305 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 CLEC10AQ8IUN9 316 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 ZNF444Q8N0Y2 327 aaPredicted RBP10.53□□□□□ -0.72
NECAP1-212ENST00000638787 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 FEZ1Q99689 392 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 NBPF3Q9H094 633 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 CTNNA3Q9UI47 895 aa10.53□□□□□ -0.72
NECAP1-212ENST00000638787 C19orf81C9J6K1 198 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 ORC4O43929 436 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.73
NECAP1-212ENST00000638787 ICA1Q05084 483 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 DGKZQ13574 1117 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 GPAT2Q6NUI2 795 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
NECAP1-212ENST00000638787 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.52□□□□□ -0.73
NECAP1-212ENST00000638787 CFHR5Q9BXR6 569 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 ZCCHC17Q9NP64 241 aaKnown RBP10.52□□□□□ -0.73
NECAP1-212ENST00000638787 INCENPQ9NQS7 918 aa10.52□□□□□ -0.73
NECAP1-212ENST00000638787 PDHXO00330 501 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 ZNF213O14771 459 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 FGRP09769 529 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 ZYXQ15942 572 aaKnown RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 IMMTQ16891 758 aaKnown RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 KIAA1211Q6ZU35 1233 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TBC1D10CQ8IV04 446 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 STAG1Q8WVM7 1258 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TMOD4Q9NZQ9 345 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 AGTPBP1Q9UPW5 1226 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 PLIN4Q96Q06 1357 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 IGKV6D-41A0A0C4DH26 115 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 A0A1W2PRG0 241 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 LBX1P52954 281 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 CRHR2Q13324 411 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 NEDD1Q8NHV4 660 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 LSG1Q9H089 658 aaKnown RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 KIAA1683Q9H0B3 1180 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 R3HDMLQ9H3Y0 253 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TOMM22Q9NS69 142 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
NECAP1-212ENST00000638787 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
NECAP1-212ENST00000638787 TSPY2A6NKD2 308 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 TSPY3P0CV98 308 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 TSPY8P0CW00 308 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 EEF2P13639 858 aaKnown RBP10.5□□□□□ -0.73
NECAP1-212ENST00000638787 USP14P54578 494 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 TFAP4Q01664 338 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 ATP2B2Q01814 1243 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
NECAP1-212ENST00000638787 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 SIAH1Q8IUQ4 282 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 RNF41Q9H4P4 317 aaPredicted RBP10.5□□□□□ -0.73
NECAP1-212ENST00000638787 ANO2Q9NQ90 1003 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 SLC45A1Q9Y2W3 748 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 NEDD4P46934 1319 aa10.5□□□□□ -0.73
NECAP1-212ENST00000638787 RANBP6O60518 1105 aaKnown RBP10.49□□□□□ -0.73
NECAP1-212ENST00000638787 PCP11498 1178 aaKnown RBP10.49□□□□□ -0.73
NECAP1-212ENST00000638787 CEP95Q96GE4 821 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 C12orf42Q96LP6 360 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 SH2D4AQ9H788 454 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 ZFYVE28Q9HCC9 887 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 RBM8AQ9Y5S9 174 aaKnown RBP10.49□□□□□ -0.73
NECAP1-212ENST00000638787 MYH4Q9Y623 1939 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
NECAP1-212ENST00000638787 PARK7Q99497 189 aaKnown RBP10.49□□□□□ -0.73
NECAP1-212ENST00000638787 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 MTMR4Q9NYA4 1195 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 TMX2Q9Y320 296 aa10.49□□□□□ -0.73
NECAP1-212ENST00000638787 CASP8AP2Q9UKL3 1982 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 GPR25O00155 361 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 CYP21A2P08686 494 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 CYP2C8P10632 490 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 VCAM1P19320 739 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 VCPKMTQ9H867 229 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 CLIP2Q9UDT6 1046 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 PNMA3Q9UL41 463 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 ADGRA2Q96PE1 1338 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 TLR2O60603 784 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 TTLL1O95922 423 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
NECAP1-212ENST00000638787 KIAA1755Q5JYT7 1200 aa10.48□□□□□ -0.73
NECAP1-212ENST00000638787 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms