RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 Q6ZUG5 572 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 YWHAEP62258 255 aaKnown RBP16.62■□□□□ 0.25
UBE3A-227ENST00000638011 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBE3A-227ENST00000638011 BRF1Q92994 677 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 FANCCQ00597 558 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 FAM186BQ8IYM0 893 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 DCTN3O75935 186 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 MCF2P10911 925 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 STX8Q9UNK0 236 aa16.62■□□□□ 0.25
UBE3A-227ENST00000638011 BZW2Q9Y6E2 419 aaKnown RBP16.62■□□□□ 0.25
UBE3A-227ENST00000638011 MAP3K1Q13233 1512 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 IBTKQ9P2D0 1353 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-227ENST00000638011 PHLPP2Q6ZVD8 1323 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 JADE1Q6IE81 842 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 CASC4Q6P4E1 433 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
UBE3A-227ENST00000638011 CUTAO60888 179 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 ZPR1O75312 459 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 IFT88Q13099 833 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 LCA5Q86VQ0 697 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 PPP2R5DQ14738 602 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 SOS1Q07889 1333 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-227ENST00000638011 TRAF5O00463 557 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 PPP1R12AO14974 1030 aaPredicted RBP16.61■□□□□ 0.25
UBE3A-227ENST00000638011 APOA1P02647 267 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 NUDCD3Q8IVD9 361 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 KDM2BQ8NHM5 1336 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 TAF11Q15544 211 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 SFMBT2Q5VUG0 894 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 RSAD2Q8WXG1 361 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 CDKL2Q92772 493 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 HYOU1Q9Y4L1 999 aa16.61■□□□□ 0.25
UBE3A-227ENST00000638011 NBPF14Q5TI25 921 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 CDC25BP30305 580 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 CDR2Q01850 454 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 ITGB1BP2Q9UKP3 347 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 DKC1O60832 514 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 EPHB4P54760 987 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 BATF3Q9NR55 127 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 GARSP41250 739 aaKnown RBP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 FNBP1Q96RU3 617 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 CTNND2Q9UQB3 1225 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 KPNA2P52292 529 aaKnown RBP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 PALM2Q8IXS6 379 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 PHKBQ93100 1093 aa16.6■□□□□ 0.25
UBE3A-227ENST00000638011 INTS9Q9NV88 658 aaKnown RBP16.6■□□□□ 0.25
UBE3A-227ENST00000638011 STRN3Q13033 797 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 SMARCA5O60264 1052 aaPredicted RBP16.59■□□□□ 0.25
UBE3A-227ENST00000638011 KRT5P13647 590 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 GUCY2CP25092 1073 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 PPP1R2P3Q6NXS1 205 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 STOML1Q9UBI4 398 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 CSGALNACT2Q8N6G5 542 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 KCNH3Q9ULD8 1083 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 CFTRP13569 1480 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 DAPK3O43293 454 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 SERPINB2P05120 415 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
UBE3A-227ENST00000638011 EEF1B2P24534 225 aaKnown RBP16.59■□□□□ 0.25
UBE3A-227ENST00000638011 DCUN1D2Q6PH85 259 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 AOX1Q06278 1338 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 POLE2P56282 527 aa16.59■□□□□ 0.25
UBE3A-227ENST00000638011 NLRP12P59046 1061 aa16.58■□□□□ 0.25
UBE3A-227ENST00000638011 HAUS4Q9H6D7 363 aa16.58■□□□□ 0.25
UBE3A-227ENST00000638011 ALDH1L1O75891 902 aa16.58■□□□□ 0.25
UBE3A-227ENST00000638011 CATSPER1Q8NEC5 780 aa16.58■□□□□ 0.25
UBE3A-227ENST00000638011 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 KRT9P35527 623 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 CCT5P48643 541 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 PDE1AP54750 535 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 TMCO4Q5TGY1 634 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 STAMBPL1Q96FJ0 436 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 KRIT1O00522 736 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 GSTA1P08263 222 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 GSTA2P09210 222 aa16.58■□□□□ 0.24
UBE3A-227ENST00000638011 PDZD4Q76G19 769 aaPredicted RBP16.58■□□□□ 0.24
UBE3A-227ENST00000638011 PYGBP11216 843 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 P4HA1P13674 534 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 ST5P78524 1137 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 SKOR1P84550 965 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 TEX12Q9BXU0 123 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 EFCAB14O75071 495 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 ANKRD35Q8N283 1001 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
UBE3A-227ENST00000638011 HNRNPCP07910 306 aaKnown RBP eCLIP16.57■□□□□ 0.247e-6■□□□□ 8.2
UBE3A-227ENST00000638011 TEDDM1Q5T9Z0 273 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms