RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IFNAR1P17181 557 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 SHMT1P34896 483 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 TCP10Q12799 353 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 TNFAIP1Q13829 316 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 LARP1BQ659C4 914 aaKnown RBP17.9■□□□□ 0.46
CLN6-219ENST00000637329 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 IL17RBQ9NRM6 502 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 RNF181Q9P0P0 153 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
CLN6-219ENST00000637329 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
CLN6-219ENST00000637329 PTMSP20962 102 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 TNNI2P48788 182 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 TROAPQ12815 778 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 NFKBIBQ15653 356 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 SH3BP5LQ7L8J4 393 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 ZSCAN29Q8IWY8 852 aaPredicted RBP17.89■□□□□ 0.45
CLN6-219ENST00000637329 FANCBQ8NB91 859 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 ATP6V1DQ9Y5K8 247 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 GJA3Q9Y6H8 435 aa17.89■□□□□ 0.45
CLN6-219ENST00000637329 IGKV6D-41A0A0C4DH26 115 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 DDX11L8A8MPP1 907 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 NMT2O60551 498 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 CDC27P30260 824 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 KIF5BP33176 963 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 NTRK3Q16288 839 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 TATDN1Q6P1N9 297 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 ZFPM1Q8IX07 1006 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 CSRNP1Q96S65 589 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 MYL10Q9BUA6 226 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
CLN6-219ENST00000637329 MTMR6Q9Y217 621 aa17.88■□□□□ 0.45
CLN6-219ENST00000637329 TCP10L2B9ZVM9 353 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 F13A1P00488 732 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
CLN6-219ENST00000637329 RXRAP19793 462 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 RAB11FIP4Q86YS3 637 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 PNMA1Q8ND90 353 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 CTCFLQ8NI51 663 aaPredicted RBP17.87■□□□□ 0.45
CLN6-219ENST00000637329 WASF1Q92558 559 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 VEZTQ9HBM0 779 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 GPRC5DQ9NZD1 345 aa17.87■□□□□ 0.45
CLN6-219ENST00000637329 CNOT7Q9UIV1 285 aaKnown RBP17.87■□□□□ 0.45
CLN6-219ENST00000637329 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
CLN6-219ENST00000637329 GOLGA6L22H0YM25 854 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 H7C1D1 291 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 FMNL1O95466 1100 aaPredicted RBP17.86■□□□□ 0.45
CLN6-219ENST00000637329 TOP1P11387 765 aaKnown RBP17.86■□□□□ 0.45
CLN6-219ENST00000637329 ADD1P35611 737 aaKnown RBP17.86■□□□□ 0.45
CLN6-219ENST00000637329 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 NUP133Q8WUM0 1156 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 DDX11Q96FC9 970 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 MTMR4Q9NYA4 1195 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 ORC3Q9UBD5 711 aaPredicted RBP17.86■□□□□ 0.45
CLN6-219ENST00000637329 STX8Q9UNK0 236 aa17.86■□□□□ 0.45
CLN6-219ENST00000637329 H3BQV1 296 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 TBC1D12O60347 775 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 FDPSP14324 419 aaKnown RBP17.85■□□□□ 0.45
CLN6-219ENST00000637329 AKR1B1P15121 316 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 MCM4P33991 863 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 NBPF9Q3BBW0 867 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 TMTC3Q6ZXV5 915 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 CCDC144CPQ8IYA2 1237 aa17.85■□□□□ 0.45
CLN6-219ENST00000637329 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLN6-219ENST00000637329 RNF26Q9BY78 433 aaPredicted RBP17.85■□□□□ 0.45
CLN6-219ENST00000637329 RBM27Q9P2N5 1060 aaKnown RBP17.85■□□□□ 0.45
CLN6-219ENST00000637329 SHTN1A0MZ66 631 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 BAG4O95429 457 aaKnown RBP17.84■□□□□ 0.45
CLN6-219ENST00000637329 TTLL1O95922 423 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 GNAQP50148 359 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
CLN6-219ENST00000637329 GRM4Q14833 912 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 CERKLQ49MI3 558 aaPredicted RBP17.84■□□□□ 0.45
CLN6-219ENST00000637329 TMEM179Q6ZVK1 233 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 CDC37L1Q7L3B6 337 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 APOBEC3FQ8IUX4 373 aaKnown RBP17.84■□□□□ 0.45
CLN6-219ENST00000637329 TMEM47Q9BQJ4 181 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
CLN6-219ENST00000637329 DEXIO95424 95 aa17.83■□□□□ 0.44
CLN6-219ENST00000637329 NBPF11Q86T75 865 aa17.83■□□□□ 0.44
CLN6-219ENST00000637329 ZSCAN16Q9H4T2 348 aaPredicted RBP17.83■□□□□ 0.44
CLN6-219ENST00000637329 PRDM10Q9NQV6 1147 aa17.83■□□□□ 0.44
CLN6-219ENST00000637329 CNTNAP5Q8WYK1 1306 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 MAP3K10Q02779 954 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 FUT2Q10981 343 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 TBC1D10BQ4KMP7 808 aaPredicted RBP17.82■□□□□ 0.44
CLN6-219ENST00000637329 C8orf76Q96K31 380 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 KANSL2Q9H9L4 492 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLN6-219ENST00000637329 PGAP2Q9UHJ9 254 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 PPP2R3BQ9Y5P8 575 aa17.82■□□□□ 0.44
CLN6-219ENST00000637329 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
CLN6-219ENST00000637329 EGFRP00533 1210 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms