RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MRPL46Q9H2W6 279 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 PPIP5K1Q6PFW1 1433 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 GOLGA8HP0CJ92 632 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 KSR2Q6VAB6 950 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 GDAP1L1Q96MZ0 367 aa19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 DDX21Q9NR30 783 aaKnown RBP eCLIP19.79■□□□□ 0.76
CACNA1A-227ENST00000636549 CALCOCO1Q9P1Z2 691 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 ARID4AP29374 1257 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 RSAD2Q8WXG1 361 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 BAG6P46379 1132 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 HERC4Q5GLZ8 1057 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 SZRD1Q7Z422 152 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 NOX5Q96PH1 765 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 EXOC7Q9UPT5 735 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 C2CD5Q86YS7 1000 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 SLITRK6Q9H5Y7 841 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 LUC7L2Q9Y383 392 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 ESYT1Q9BSJ8 1104 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 RBM28Q9NW13 759 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 LMCD1Q9NZU5 365 aa19.78■□□□□ 0.76
CACNA1A-227ENST00000636549 ATF7P17544 494 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-227ENST00000636549 TBC1D8BQ0IIM8 1120 aa19.77■□□□□ 0.76
CACNA1A-227ENST00000636549 TTBK2Q6IQ55 1244 aa19.77■□□□□ 0.76
CACNA1A-227ENST00000636549 NLRX1Q86UT6 975 aa19.77■□□□□ 0.76
CACNA1A-227ENST00000636549 OSTNP61366 133 aa19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 SLC9A5Q14940 896 aa19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 HHATQ5VTY9 493 aa19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 SND1Q7KZF4 910 aaKnown RBP eCLIP19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 HDAC11Q96DB2 347 aa19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 RPS6KC1Q96S38 1066 aa19.77■□□□□ 0.75
CACNA1A-227ENST00000636549 KRT15P19012 456 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 CCDC157Q569K6 752 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 MIER3Q7Z3K6 550 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 DISC1Q9NRI5 854 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 IFNB1P01574 187 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 ADCY7P51828 1080 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 KIAA1841Q6NSI8 718 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 LCA5Q86VQ0 697 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 CCDC105Q8IYK2 499 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 CCDC141Q6ZP82 1450 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 LLGL1Q15334 1064 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 HACE1Q8IYU2 909 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 CEP104O60308 925 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 AFAP1L2Q8N4X5 818 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 FTOQ9C0B1 505 aaKnown RBP eCLIP19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 DNM3Q9UQ16 869 aa19.76■□□□□ 0.75
CACNA1A-227ENST00000636549 CASQ2O14958 399 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 KIF3CO14782 793 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 CETN3O15182 167 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 NEMFO60524 1076 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 TRIM37O94972 964 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 MARK3P27448 753 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 ATICP31939 592 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 XAGE2Q96GT9 111 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 ZBTB41Q5SVQ8 909 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 GDAP1Q8TB36 358 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 TAB2Q9NYJ8 693 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 TNRQ92752 1358 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 LIG4P49917 911 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 PRR16Q569H4 304 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 F13A1P00488 732 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 JADE1Q6IE81 842 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 CCDC26Q8TAB7 109 aa19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 RBM46Q8TBY0 533 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-227ENST00000636549 LRRIQ4A6NIV6 560 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 SMIM24O75264 130 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 STAM2O75886 525 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 BMP15O95972 392 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 PDE1AP54750 535 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 TNNC1P63316 161 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 PDCD7Q8N8D1 485 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 EFCC1Q9HA90 598 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 ERCC6LQ2NKX8 1250 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 UBL4BQ8N7F7 174 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 NLRC4Q9NPP4 1024 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 PLCH2O75038 1416 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 TRAPPC10P48553 1259 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 POLA2Q14181 598 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 PCK1P35558 622 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 XKR9Q5GH70 373 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 CSGALNACT2Q8N6G5 542 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 HACD3Q9P035 362 aa19.74■□□□□ 0.75
CACNA1A-227ENST00000636549 PDE6AP16499 860 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 SNAP25P60880 206 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 PALM2Q8IXS6 379 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 ATP11AP98196 1134 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 TYRO3Q06418 890 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 MX2P20592 715 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 MCUR1Q96AQ8 359 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 SRGAP1Q7Z6B7 1085 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 VPS54Q9P1Q0 977 aa19.73■□□□□ 0.75
CACNA1A-227ENST00000636549 SEPT9Q9UHD8 586 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms