RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 USP17L10C9JJH3 530 aa13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 BCRP11274 1271 aa13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 TDO2P48775 406 aa13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 LACTBP83111 547 aaPredicted RBP13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 CPA4Q9UI42 421 aa13.3□□□□□ -0.28
SRP54-AS1-205ENST00000636540 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 C19orf81C9J6K1 198 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 AKR1B1P15121 316 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 CDK8P49336 464 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 SEPT2Q15019 361 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 FBXO46Q6PJ61 603 aaPredicted RBP13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 TMEM179Q6ZVK1 233 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 C12orf42Q96LP6 360 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 FEZ1Q99689 392 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 CABP5Q9NP86 173 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 PNMA3Q9UL41 463 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 TRIM17Q9Y577 477 aa13.29□□□□□ -0.28
SRP54-AS1-205ENST00000636540 PLXNB2O15031 1838 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 PATL2C9JE40 543 aaKnown RBP13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 IFNL3Q8IZI9 196 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 ACER1Q8TDN7 264 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 ASCC2Q9H1I8 757 aaPredicted RBP13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 HELLSQ9NRZ9 838 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
SRP54-AS1-205ENST00000636540 GSPT1P15170 499 aaKnown RBP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 RASA1P20936 1047 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CTGFP29279 349 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ICA1Q05084 483 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ZYXQ15942 572 aaKnown RBP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L2Q6R6M4 530 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ZNF589Q86UQ0 364 aaPredicted RBP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 NACAP1Q9BZK3 213 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 NAPBQ9H115 298 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 HPS5Q9UPZ3 1129 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.29
SRP54-AS1-205ENST00000636540 A0A1W2PRG0 241 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 APPP05067 770 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 VCAM1P19320 739 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 HOXA7P31268 230 aaPredicted RBP13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP14P54578 494 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 FAM110CQ1W6H9 321 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 TTC22Q5TAA0 569 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 VPS53Q5VIR6 699 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CCDC171Q6TFL3 1326 aa13.26□□□□□ -0.29
SRP54-AS1-205ENST00000636540 BRCA2P51587 3418 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SDSP20132 328 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 OSBPP22059 807 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PPARAQ07869 468 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 KIF22Q14807 665 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MCMDC2Q4G0Z9 681 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 TRIM47Q96LD4 638 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
SRP54-AS1-205ENST00000636540 GNRH1P01148 92 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 GCLCP48506 637 aaPredicted RBP13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SIAH1Q8IUQ4 282 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ARHGEF10LQ9HCE6 1279 aa13.24□□□□□ -0.29
SRP54-AS1-205ENST00000636540 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 HIP1O00291 1037 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PSMC4P43686 418 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 FCGRTP55899 365 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 HERVK_113P62684 666 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ALX1Q15699 326 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MORF4L1Q9UBU8 362 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ANAPC4Q9UJX5 808 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms