RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 TOMM22Q9NS69 142 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRNA7-212ENST00000636271 KDM4AO75164 1064 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 SH3BP5LQ7L8J4 393 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 SGMS1Q86VZ5 419 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 KRT23Q9C075 422 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 ZSWIM5Q9P217 1185 aa18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
CHRNA7-212ENST00000636271 TCP10L2B9ZVM9 353 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 CDKL5O76039 1030 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 EPS15P42566 896 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 RNF41Q9H4P4 317 aaPredicted RBP18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 LY9Q9HBG7 655 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 ASTN2O75129 1339 aaPredicted RBP18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 NAV1Q8NEY1 1877 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 DDTLA6NHG4 134 aaPredicted RBP18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 LIFRP42702 1097 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 TYRO3Q06418 890 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 OTUD7BQ6GQQ9 843 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 SCAF8Q9UPN6 1271 aaKnown RBP18.15■□□□□ 0.5
CHRNA7-212ENST00000636271 ROBO3Q96MS0 1386 aa18.14■□□□□ 0.5
CHRNA7-212ENST00000636271 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 MMP14P50281 582 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 CPLX2Q6PUV4 134 aaKnown RBP18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 TRPM4Q8TD43 1214 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 VEZTQ9HBM0 779 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 MRVI1Q9Y6F6 885 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 FOCADQ5VW36 1801 aa18.14■□□□□ 0.49
CHRNA7-212ENST00000636271 ZBTB43O43298 467 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 BRAPQ7Z569 592 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 RTEL1Q9NZ71 1219 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 ZKSCAN5Q9Y2L8 839 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 H7C1D1 291 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 IFIT3O14879 490 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 ORC4O43929 436 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 ADCY5O95622 1261 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 PTMAP06454 111 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 RXRAP19793 462 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 KIF4BQ2VIQ3 1234 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 FAM200AQ8TCP9 573 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 ECM29Q5VYK3 1845 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 CNTNAP1P78357 1384 aa18.13■□□□□ 0.49
CHRNA7-212ENST00000636271 MYO1BO43795 1136 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 RANBP6O60518 1105 aaKnown RBP18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 ENTPD3O75355 529 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 CDC27P30260 824 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 ME1P48163 572 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 GABPAQ06546 454 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 PDE4BQ07343 736 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 C16orf86Q6ZW13 317 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 ZKSCAN3Q9BRR0 538 aa18.12■□□□□ 0.49
CHRNA7-212ENST00000636271 GOLGA8AA7E2F4 631 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 PCP11498 1178 aaKnown RBP18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 CDK8P49336 464 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 HIRAP54198 1017 aaPredicted RBP18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 CCDC73Q6ZRK6 1079 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 ZSCAN29Q8IWY8 852 aaPredicted RBP18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 ESR2Q92731 530 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 LAMB1P07942 1786 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 MYH1P12882 1939 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 ALG1Q9BT22 464 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 GOLPH3LQ9H4A5 285 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
CHRNA7-212ENST00000636271 CTAGE5O15320 804 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 YEATS4O95619 227 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 RASA1P20936 1047 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 KIF23Q02241 960 aaPredicted RBP18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 NTRK3Q16288 839 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 MYSM1Q5VVJ2 828 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 LINC00301Q8NCQ3 95 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 MTA3Q9BTC8 594 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 TMEM39BQ9GZU3 492 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 DHX36Q9H2U1 1008 aaKnown RBP18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 DNAJC18Q9H819 358 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 MKNK2Q9HBH9 465 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 SERPINB13Q9UIV8 391 aa18.1■□□□□ 0.49
CHRNA7-212ENST00000636271 NID2Q14112 1375 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms