RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 LCORLQ8N3X6 602 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 GPRC5AQ8NFJ5 357 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 ACER1Q8TDN7 264 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 U2AF1L4Q8WU68 220 aaKnown RBP8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 GCC1Q96CN9 775 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 DNAJC2Q99543 621 aaKnown RBP8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 HAUS7Q99871 368 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 BOLA2Q9H3K6 86 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 MYH7P12883 1935 aa8.87□□□□□ -0.99
CACNA1A-222ENST00000636022 BAZ2AQ9UIF9 1905 aaKnown RBP8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 H0YGN5 161 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 ADD2P35612 726 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 RAB3GAP1Q15042 981 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 HABP4Q5JVS0 413 aaKnown RBP8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 SDR42E1Q8WUS8 393 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 CRNKL1Q9BZJ0 848 aaKnown RBP8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 KIAA1683Q9H0B3 1180 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 DCP1AQ9NPI6 582 aaPredicted RBP8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 MCM9Q9NXL9 1143 aa8.86□□□□□ -0.99
CACNA1A-222ENST00000636022 A0A1W2PRG0 241 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 PRKAB2O43741 272 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 SMARCA5O60264 1052 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 CNMDO75829 334 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 HMGCRP04035 888 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 CHGBP05060 677 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 CYP2D6P10635 497 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 XRCC5P13010 732 aaKnown RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 CAPN2P17655 700 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 MAPK4P31152 587 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 USP14P54578 494 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 ERVK-9P63128 1117 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 ERVK-24P63145 666 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 TRIM32Q13049 653 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 SEPT2Q15019 361 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 UBE3CQ15386 1083 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 ZYXQ15942 572 aaKnown RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 CATSPERGQ6ZRH7 1159 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 GTF3C2Q8WUA4 911 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 TRIB2Q92519 343 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 USP6NLQ92738 828 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 DEFB118Q96PH6 123 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 LRRCC1Q9C099 1032 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 PORCNQ9H237 461 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 ARMT1Q9H993 441 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 TAOK2Q9UL54 1235 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 MYH8P13535 1937 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 RLFQ13129 1914 aa8.85□□□□□ -0.99
CACNA1A-222ENST00000636022 ALPK3Q96L96 1907 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 FARP2O94887 1054 aaPredicted RBP8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 MBD4O95243 580 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 TFRCP02786 760 aaKnown RBP8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 VCAM1P19320 739 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 MORN1Q5T089 497 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 MAP3K21Q5TCX8 1036 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 LBX2Q6XYB7 198 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 SIAH1Q8IUQ4 282 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 SLC44A5Q8NCS7 719 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 FEZ1Q99689 392 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 DCTPP1Q9H773 170 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 ATP8A2Q9NTI2 1148 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 RABGAP1Q9Y3P9 1069 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 COL6A3P12111 3177 aa8.84□□□□□ -0.99
CACNA1A-222ENST00000636022 RPTORQ8N122 1335 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 CYP2B6P20813 491 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
CACNA1A-222ENST00000636022 KIAA1755Q5JYT7 1200 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 C12orf60Q5U649 245 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 GPR142Q7Z601 462 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 SOCS4Q8WXH5 440 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 DPF3Q92784 378 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 NUDT12Q9BQG2 462 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 PAGR1Q9BTK6 254 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 HTATIP2Q9BUP3 242 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.83□□□□□ -1
CACNA1A-222ENST00000636022 PUS7LQ9H0K6 701 aaKnown RBP8.83□□□□□ -1
CACNA1A-222ENST00000636022 RPAP3Q9H6T3 665 aaPredicted RBP8.83□□□□□ -1
CACNA1A-222ENST00000636022 ECHDC1Q9NTX5 307 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 BTBD7Q9P203 1132 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 SWAP70Q9UH65 585 aa8.83□□□□□ -1
CACNA1A-222ENST00000636022 CYP2D7A0A087X1C5 515 aa8.82□□□□□ -1
CACNA1A-222ENST00000636022 SPDYE16A6NNV3 312 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms