RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 KIF5CO60282 957 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 GCFC2P16383 781 aaKnown RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 FANCCQ00597 558 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PI16Q6UXB8 463 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 FDPSP14324 419 aaKnown RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 NDUFA8P51970 172 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 STXBP4Q6ZWJ1 553 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CREBRFQ8IUR6 639 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PNMA1Q8ND90 353 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CUL5Q93034 780 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 NSUN4Q96CB9 384 aaKnown RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PKNOX2Q96KN3 472 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 DHX36Q9H2U1 1008 aaKnown RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 TTC12Q9H892 705 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 SPTLC3Q9NUV7 552 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 MYO3BQ8WXR4 1341 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 RRAGBQ5VZM2 374 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 KRT79Q5XKE5 535 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 FEZ1Q99689 392 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 OSBPL5Q9H0X9 879 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 BTBD18B2RXH4 712 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CTDNEP1O95476 244 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PTGS1P23219 599 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 FAM193AP78312 1265 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PRPHP41219 470 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 ST3GAL1Q11201 340 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 ARHGAP29Q52LW3 1261 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 FBXW7Q969H0 707 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CNKSR1Q969H4 720 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PCDHA4Q9UN74 947 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 SERPINB2P05120 415 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 ITPK1Q13572 414 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 RCSD1Q6JBY9 416 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 MPNDQ8N594 471 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 UBXN4Q92575 508 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PHKBQ93100 1093 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 GJD4Q96KN9 370 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PCMTD1Q96MG8 357 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 TTF2Q9UNY4 1162 aaKnown RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PFKFB3Q16875 520 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SPATA1Q5VX52 437 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF772Q68DY9 489 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SP8Q8IXZ3 490 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 NT5C3AQ9H0P0 336 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 DCP1AQ9NPI6 582 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 HPS5Q9UPZ3 1129 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 CLIC4Q9Y696 253 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC175P0C221 793 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 KRT83P78385 493 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SEPT2Q15019 361 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 TEX35Q5T0J7 233 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 STX10O60499 249 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SLU7O95391 586 aaKnown RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SF3B2Q13435 895 aaKnown RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SPECC1LQ69YQ0 1117 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC82Q8N4S0 544 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 ERO1AQ96HE7 468 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 SCN11AQ9UI33 1791 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 H7C1D1 291 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 PES1O00541 588 aaKnown RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 PPP1R12BO60237 982 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 MECOMQ03112 1051 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 OTUD7BQ6GQQ9 843 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 CNNM4Q6P4Q7 775 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 CYB5R4Q7L1T6 521 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 TMTC1Q8IUR5 882 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 LRRC8AQ8IWT6 810 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 ANKS1AQ92625 1134 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 NUCKS1Q9H1E3 243 aaKnown RBP5.15□□□□□ -1.58
SCN1A-210ENST00000635776 EXOC1Q9NV70 894 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 IFNKQ9P0W0 207 aa5.15□□□□□ -1.58
SCN1A-210ENST00000635776 NEDD4P46934 1319 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 FGRP09769 529 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 TNIP1Q15025 636 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 NEDD1Q8NHV4 660 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 DHX58Q96C10 678 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 SPZ1Q9BXG8 430 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 CTDP1Q9Y5B0 961 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 BIN1O00499 593 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 NPR1P16066 1061 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 MMP14P50281 582 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 DPP8Q6V1X1 898 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 PODNQ7Z5L7 613 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 DAGLBQ8NCG7 672 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 MROH7-TTC4A0A0A0MT08 1334 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 LAMB4A4D0S4 1761 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 N4BP3O15049 544 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 FOSP01100 380 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 ADCY7P51828 1080 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 HAUS3Q68CZ6 603 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 TEKT1Q969V4 418 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 FAM163AQ96GL9 167 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 RIOK1Q9BRS2 568 aaKnown RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 ESYT2A0FGR8 921 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 USO1O60763 962 aaKnown RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 CYLC1P35663 651 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-210ENST00000635776 GRM4Q14833 912 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 RETREG2Q8NC44 543 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 CERKQ8TCT0 537 aa5.15□□□□□ -1.59
SCN1A-210ENST00000635776 CELF1Q92879 486 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms