RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 ITPKCQ96DU7 683 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 BHLHE41Q9C0J9 482 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 IP6K2Q9UHH9 426 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 SPEF1Q9Y4P9 236 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 SAMM50Q9Y512 469 aa9.32□□□□□ -0.92
SMARCA2-243ENST00000635590 RPIAP49247 311 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 SEPT7Q16181 437 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 KLHL6Q8WZ60 621 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 ZHX3Q9H4I2 956 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 PHAXQ9H814 394 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 BRD7Q9NPI1 651 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 LUC7LQ9NQ29 371 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 PRDM11Q9NQV5 511 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 A0A1W2PQU0 124 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 ZNF500O60304 480 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 POU3F2P20265 443 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 NNTQ13423 1086 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 GRIN3AQ8TCU5 1115 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 USP33Q8TEY7 942 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 RUNDC1Q96C34 613 aa9.31□□□□□ -0.92
SMARCA2-243ENST00000635590 SPATA31C2B4DYI2 1134 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 NPTXRO95502 500 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 MYL3P08590 195 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 NME2P22392 152 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 RNF144AP50876 292 aaPredicted RBP9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 LLGL2Q6P1M3 1020 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 STK35Q8TDR2 534 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 ZCCHC2Q9C0B9 1178 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 JADE2Q9NQC1 790 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 LRRC4BQ9NT99 713 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
SMARCA2-243ENST00000635590 TRAV20A0A0B4J274 112 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 CCER2I3L3R5 266 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 HSP90AA1P07900 732 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 SERPINB3P29508 390 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 PPP2R3AQ06190 1150 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 CEP120Q8N960 986 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 STRBPQ96SI9 672 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 MTFR1LQ9H019 292 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 PUF60Q9UHX1 559 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 WDR7Q9Y4E6 1490 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
SMARCA2-243ENST00000635590 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 NFKBIEO00221 500 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 AGRPO00253 132 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 FBXO21O94952 628 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 PGRP06401 933 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 FAM163BP0C2L3 166 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 NEK4P51957 841 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 LRRC14Q15048 493 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 ANO1Q5XXA6 986 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 ENAHQ8N8S7 591 aaPredicted RBP9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 NXPE3Q969Y0 559 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 TRIM39Q9HCM9 518 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 LUZP4Q9P127 313 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 CD109Q6YHK3 1445 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 ZCCHC11Q5TAX3 1644 aaKnown RBP9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 RASSF10A6NK89 507 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 CD2BP2O95400 341 aaKnown RBP9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 SCUBE1Q8IWY4 988 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 KLF15Q9UIH9 416 aa9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 LUC7L2Q9Y383 392 aaKnown RBP9.28□□□□□ -0.92
SMARCA2-243ENST00000635590 KAT6BQ8WYB5 2073 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 HTR3BO95264 441 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF280DQ6N043 979 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 HDGFL2Q7Z4V5 671 aaPredicted RBP9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 ANKRD42Q8N9B4 389 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 MRGPRX2Q96LB1 330 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 TTC1Q99614 292 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 ZFAND3Q9H8U3 227 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 ZFATQ9P243 1243 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 SUCOQ9UBS9 1254 aaKnown RBP9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 CCNB3Q8WWL7 1395 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 UGGT2Q9NYU1 1516 aa9.27□□□□□ -0.93
SMARCA2-243ENST00000635590 NEMP1O14524 444 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 APAF1O14727 1248 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 KPNA6O60684 536 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 RARAP10276 462 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 LIG1P18858 919 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ID4P47928 161 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 ZNF460Q14592 562 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 PTPN21Q16825 1174 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 SV2CQ496J9 727 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 OVOS1Q6IE37 1185 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 SULF2Q8IWU5 870 aa9.26□□□□□ -0.93
SMARCA2-243ENST00000635590 SMAP1Q8IYB5 467 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms