RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 ANAPC4Q9UJX5 808 aa12.2□□□□□ -0.46
PSPC1-207ENST00000635251 BCORQ6W2J9 1755 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 SYNRGQ9UMZ2 1314 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 CYP2D7A0A087X1C5 515 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 EFCAB8A8MWE9 144 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 AKR1B15C9JRZ8 316 aaPredicted RBP12.19□□□□□ -0.46
PSPC1-207ENST00000635251 PRPF3O43395 683 aaKnown RBP12.19□□□□□ -0.46
PSPC1-207ENST00000635251 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 NTSR2O95665 410 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 TPM1P09493 284 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 DYNLL1P63167 89 aaKnown RBP12.19□□□□□ -0.46
PSPC1-207ENST00000635251 PKN1Q16512 942 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 SYMPKQ92797 1274 aaKnown RBP12.19□□□□□ -0.46
PSPC1-207ENST00000635251 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 RBM28Q9NW13 759 aaKnown RBP12.19□□□□□ -0.46
PSPC1-207ENST00000635251 FAM53CQ9NYF3 392 aa12.19□□□□□ -0.46
PSPC1-207ENST00000635251 A0A087X0B3 334 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 FANCGO15287 622 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 BMP15O95972 392 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 SLFN14P0C7P3 912 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CASP1P29466 404 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 NR1I3Q14994 352 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
PSPC1-207ENST00000635251 ZNF174Q15697 407 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 EARS2Q5JPH6 523 aaKnown RBP12.18□□□□□ -0.46
PSPC1-207ENST00000635251 SPATA1Q5VX52 437 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 ANKRD18AQ8IVF6 992 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 SPATA20Q8TB22 786 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 MED15Q96RN5 788 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 TADA3O75528 432 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CALM1P0DP23 149 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CALM2P0DP24 149 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 CALM3P0DP25 149 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 TERF2Q15554 542 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 FERMT2Q96AC1 680 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 WDR24Q96S15 920 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 PLCH1Q4KWH8 1693 aa12.18□□□□□ -0.46
PSPC1-207ENST00000635251 TEX33O43247 280 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
PSPC1-207ENST00000635251 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 IGSF22Q8N9C0 903 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 RIOK1Q9BRS2 568 aaKnown RBP12.17□□□□□ -0.46
PSPC1-207ENST00000635251 NHSL1Q5SYE7 1610 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 CCDC175P0C221 793 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
PSPC1-207ENST00000635251 PPP2R3AQ06190 1150 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 TEX35Q5T0J7 233 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 SMYD4Q8IYR2 804 aaPredicted RBP12.17□□□□□ -0.46
PSPC1-207ENST00000635251 CCDC12Q8WUD4 166 aaPredicted RBP12.17□□□□□ -0.46
PSPC1-207ENST00000635251 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 BRIP1Q9BX63 1249 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 FHOD1Q9Y613 1164 aa12.17□□□□□ -0.46
PSPC1-207ENST00000635251 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 PNMA6AP0CW24 399 aaPredicted RBP12.16□□□□□ -0.46
PSPC1-207ENST00000635251 SIK1P57059 783 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 RBL2Q08999 1139 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 FUT2Q10981 343 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 MTF1Q14872 753 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 CTCFLQ8NI51 663 aaPredicted RBP12.16□□□□□ -0.46
PSPC1-207ENST00000635251 STAMQ92783 540 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 PANX2Q96RD6 677 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 WNT7AO00755 349 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 DDAH1O94760 285 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 DPYDQ12882 1025 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 UBE4AQ14139 1066 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 LZTFL1Q9NQ48 299 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
PSPC1-207ENST00000635251 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.46
PSPC1-207ENST00000635251 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 USP17L21D6R901 530 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 NLRP5P59047 1200 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 TROAPQ12815 778 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 PTGDRQ13258 359 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 ITPK1Q13572 414 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 CUL4BQ13620 913 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 DDB1Q16531 1140 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
PSPC1-207ENST00000635251 CTR9Q6PD62 1173 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 TMTC3Q6ZXV5 915 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 CREBRFQ8IUR6 639 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 NAA15Q9BXJ9 866 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms