RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 GYG1P46976 350 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 NCBP1Q09161 790 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 VPS72Q15906 364 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 ISM2Q6H9L7 571 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 TMED8Q6PL24 325 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 ADGRA1Q86SQ6 560 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 IQCA1Q86XH1 822 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 REM2Q8IYK8 340 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 MLKLQ8NB16 471 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 SDR42E1Q8WUS8 393 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 RIOK1Q9BRS2 568 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 HSD3B7Q9H2F3 369 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 BRMS1Q9HCU9 246 aa9.24□□□□□ -0.93
GPC3-204ENST00000631057 TRMT1Q9NXH9 659 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 CGNQ9P2M7 1197 aaKnown RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
GPC3-204ENST00000631057 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 PRPF3O43395 683 aaKnown RBP9.23□□□□□ -0.93
GPC3-204ENST00000631057 FGRP09769 529 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 ATP1A3P13637 1013 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 KRT2P35908 639 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 NR5A1Q13285 461 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 CFAP100Q494V2 611 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 IFIT1BQ5T764 474 aaKnown RBP9.23□□□□□ -0.93
GPC3-204ENST00000631057 NT5DC1Q5TFE4 455 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 E4F1Q66K89 784 aaPredicted RBP9.23□□□□□ -0.93
GPC3-204ENST00000631057 VSTM4Q8IW00 320 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 ENAHQ8N8S7 591 aaPredicted RBP9.23□□□□□ -0.93
GPC3-204ENST00000631057 PPP1R13BQ96KQ4 1090 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 C8orf37Q96NL8 207 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 AATFQ9NY61 560 aaKnown RBP eCLIP9.23□□□□□ -0.931e-13■■■■■ 127.7
GPC3-204ENST00000631057 MAN1B1Q9UKM7 699 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 PCDHB6Q9Y5E3 794 aa9.23□□□□□ -0.93
GPC3-204ENST00000631057 CNTNAP4Q9C0A0 1308 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 POLR2DO15514 142 aaKnown RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 ORC4O43929 436 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 MORC3Q14149 939 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 CT47A1Q5JQC4 288 aaPredicted RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 SLC10A5Q5PT55 438 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 FBXO33Q7Z6M2 555 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 FOXP4Q8IVH2 680 aaPredicted RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 SMAP1Q8IYB5 467 aaPredicted RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 CCDC82Q8N4S0 544 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 FERMT2Q96AC1 680 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 ERO1AQ96HE7 468 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 FAM84BQ96KN1 310 aaPredicted RBP9.22□□□□□ -0.93
GPC3-204ENST00000631057 PHF20Q9BVI0 1012 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 CABP5Q9NP86 173 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 SERTAD1Q9UHV2 236 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 MINPP1Q9UNW1 487 aa9.22□□□□□ -0.93
GPC3-204ENST00000631057 ACTN4O43707 911 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 SARSP49591 514 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.93
GPC3-204ENST00000631057 DYNLL1P63167 89 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 FUT2Q10981 343 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 SPECC1Q5M775 1068 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 C3orf67Q6ZVT6 689 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 CMTR1Q8N1G2 835 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 LINC00116Q8NCU8 138 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 ENOX1Q8TC92 643 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 FEZ1Q99689 392 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 CRNKL1Q9BZJ0 848 aaKnown RBP9.21□□□□□ -0.93
GPC3-204ENST00000631057 ANKRD2Q9GZV1 360 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 FANCLQ9NW38 375 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 USP21Q9UK80 565 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 MYH1P12882 1939 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 MYH8P13535 1937 aa9.21□□□□□ -0.93
GPC3-204ENST00000631057 NAV1Q8NEY1 1877 aa9.21□□□□□ -0.94
GPC3-204ENST00000631057 BTAF1O14981 1849 aa9.21□□□□□ -0.94
GPC3-204ENST00000631057 SBF2Q86WG5 1849 aa9.21□□□□□ -0.94
GPC3-204ENST00000631057 FOXN1O15353 648 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 SLU7O95391 586 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 ATP2B1P20020 1258 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 NT5C2P49902 561 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 PLCD1P51178 756 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 GRIN1Q05586 938 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 PDE4BQ07343 736 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 PKN1Q16512 942 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 DPF2Q92785 391 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 CSRNP2Q9H175 543 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ATP8A2Q9NTI2 1148 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 VPS54Q9P1Q0 977 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.2□□□□□ -0.947e-6■■■■■ 33.6
GPC3-204ENST00000631057 TAF1LQ8IZX4 1826 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 CNTNAP5Q8WYK1 1306 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms