RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 ARMCX6Q7L4S7 300 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 GALNT12Q8IXK2 581 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 TP53I13Q8NBR0 393 aaPredicted RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 FRAT1Q92837 279 aaPredicted RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 INTS4Q96HW7 963 aaKnown RBP2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 TEPSINQ96N21 525 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 ARID3AQ99856 593 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 ABCB6Q9NP58 842 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 SRRDQ9UH36 339 aa2.61□□□□□ -1.99
SPTAN1-216ENST00000629047 ZCCHC6Q5VYS8 1495 aaKnown RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 CCDC66A2RUB6 948 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 DCDC2CA8MYV0 355 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 PEX10O60683 326 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 KIF20AO95235 890 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 CBX7O95931 251 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 RPLP1P05386 114 aaKnown RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 CALRP27797 417 aaKnown RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 PDE6BP35913 854 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 HMGA2P52926 109 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 TERF1P54274 439 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 IRX6P78412 446 aaPredicted RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 TEX2Q8IWB9 1127 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 TMEFF1Q8IYR6 380 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 TTC16Q8NEE8 873 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 RIN3Q8TB24 985 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 HELQQ8TDG4 1101 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 GPBAR1Q8TDU6 330 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 SORCS2Q96PQ0 1159 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 GTPBP4Q9BZE4 634 aaKnown RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 MYH16Q9H6N6 1097 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 ZNF552Q9H707 407 aaPredicted RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 UPF2Q9HAU5 1272 aaKnown RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 MBD1Q9UIS9 605 aaPredicted RBP2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 MAPK8IP1Q9UQF2 711 aa2.6□□□□□ -1.99
SPTAN1-216ENST00000629047 CEP162Q5TB80 1403 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 ZC3H12DA2A288 527 aaKnown RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 FZD6O60353 706 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 EIF4EBP3O60516 100 aaPredicted RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 TNNT3P45378 269 aaPredicted RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 RGS3P49796 1198 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 MRE11P49959 708 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 ERVK-24P63145 666 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 PROSER2Q86WR7 435 aaPredicted RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 C12orf40Q86WS4 652 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 CREG2Q8IUH2 290 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 TMEM151BQ8IW70 566 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 ZFPM1Q8IX07 1006 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 Q8N1X5 172 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 DDX54Q8TDD1 881 aaKnown RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 VWCEQ96DN2 955 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 DNAJC2Q99543 621 aaKnown RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 MIPEPQ99797 713 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 CHMP4AQ9BY43 222 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 KRTAP3-1Q9BYR8 98 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 SLC6A17Q9H1V8 727 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 EHD4Q9H223 541 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 CHMP4BQ9H444 224 aaKnown RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 FBRSQ9HAH7 460 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 NPHS2Q9NP85 383 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 KRT82Q9NSB4 513 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 CCDC87Q9NVE4 849 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 EBF1Q9UH73 591 aa2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 TPX2Q9ULW0 747 aaKnown RBP2.59□□□□□ -1.99
SPTAN1-216ENST00000629047 TNIKQ9UKE5 1360 aa2.59□□□□□ -2
SPTAN1-216ENST00000629047 GOLGA6L22H0YM25 854 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 ZGLP1P0C6A0 271 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 SDHBP21912 280 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 ADAM17P78536 824 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 TNK2Q07912 1038 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 SFRP5Q5T4F7 317 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 KIAA0319Q5VV43 1072 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 MAP1SQ66K74 1059 aaPredicted RBP2.58□□□□□ -2
SPTAN1-216ENST00000629047 FERMT3Q86UX7 667 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 SIRT2Q8IXJ6 389 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 ZNF622Q969S3 477 aaKnown RBP eCLIP2.58□□□□□ -2
SPTAN1-216ENST00000629047 SHISA4Q96DD7 197 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 SIGLEC10Q96LC7 697 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 MRIQ9BWK5 157 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 YBX2Q9Y2T7 364 aaKnown RBP2.58□□□□□ -2
SPTAN1-216ENST00000629047 IRAK3Q9Y616 596 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 ZBED9Q6R2W3 1325 aa2.58□□□□□ -2
SPTAN1-216ENST00000629047 K7ESM1 405 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 DYNC1I1O14576 645 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CILPO75339 1184 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CDR1P51861 262 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 SRSF3P84103 164 aaKnown RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 DMTNQ08495 405 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CHAF1AQ13111 956 aaPredicted RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 NKG7Q16617 165 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CC2D1BQ5T0F9 858 aaKnown RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 C22orf34Q6ZV56 151 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 ZNF771Q7L3S4 317 aaPredicted RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 SULF2Q8IWU5 870 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 SP8Q8IXZ3 490 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 ADGRG2Q8IZP9 1017 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 GJD3Q8N144 294 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 GRIN3AQ8TCU5 1115 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CLP1Q92989 425 aaKnown RBP2.57□□□□□ -2
SPTAN1-216ENST00000629047 CCDC120Q96HB5 630 aa2.57□□□□□ -2
SPTAN1-216ENST00000629047 CNTD2Q9H8S5 307 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms