RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 SEPT4O43236 478 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 PRR29P0C7W0 189 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 AVPR2P30518 371 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 CYP2C19P33261 490 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 GRIK5Q16478 980 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 ADHFE1Q8IWW8 467 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 JARID2Q92833 1246 aaPredicted RBP7.81□□□□□ -1.16
LINC00649-220ENST00000628906 TEKT1Q969V4 418 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 PORCNQ9H237 461 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 CERS4Q9HA82 394 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC00649-220ENST00000628906 RBPJLQ9UBG7 517 aa7.81□□□□□ -1.16
LINC00649-220ENST00000628906 PEX10O60683 326 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 CTNND1O60716 968 aaKnown RBP7.8□□□□□ -1.16
LINC00649-220ENST00000628906 CA3P07451 260 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 TMEM67Q5HYA8 995 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 ANO1Q5XXA6 986 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 NKD2Q969F2 451 aaPredicted RBP7.8□□□□□ -1.16
LINC00649-220ENST00000628906 SH2B1Q9NRF2 756 aaPredicted RBP7.8□□□□□ -1.16
LINC00649-220ENST00000628906 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 MUTYHQ9UIF7 546 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 SLC4A7Q9Y6M7 1214 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 KMT2EQ8IZD2 1858 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 BPTFQ12830 3046 aa7.8□□□□□ -1.16
LINC00649-220ENST00000628906 ZNF536O15090 1300 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 A0A1W2PQ45 241 aaPredicted RBP7.79□□□□□ -1.16
LINC00649-220ENST00000628906 A0A1W2PQY0 241 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 TAF5LO75529 589 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 HOXA7P31268 230 aaPredicted RBP7.79□□□□□ -1.16
LINC00649-220ENST00000628906 VCPP55072 806 aaKnown RBP7.79□□□□□ -1.16
LINC00649-220ENST00000628906 ERVK-9P63128 1117 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 ERVK-24P63145 666 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 TAP1Q03518 808 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 OTOP2Q7RTS6 562 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 ARNTL2Q8WYA1 636 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 MPHOSPH8Q99549 860 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 CHPF2Q9P2E5 772 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 PHIPQ8WWQ0 1821 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 ZZEF1O43149 2961 aa7.79□□□□□ -1.16
LINC00649-220ENST00000628906 SLC15A5A6NIM6 579 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 ATP2A2P16615 1042 aaKnown RBP7.78□□□□□ -1.16
LINC00649-220ENST00000628906 CDK7P50613 346 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 HERVK_113P62684 666 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 TCP10Q12799 353 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 SPP2Q13103 211 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 HHIPL2Q6UWX4 724 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 RNF135Q8IUD6 432 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 CCAR1Q8IX12 1150 aaKnown RBP7.78□□□□□ -1.16
LINC00649-220ENST00000628906 NPLOC4Q8TAT6 608 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-220ENST00000628906 TSPYL4Q9UJ04 414 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 FBXO3Q9UK99 471 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 FAM50BQ9Y247 325 aa7.78□□□□□ -1.16
LINC00649-220ENST00000628906 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
LINC00649-220ENST00000628906 GLRX3O76003 335 aaKnown RBP7.77□□□□□ -1.17
LINC00649-220ENST00000628906 PTPREP23469 700 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 HMGCS2P54868 508 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 FAM47AQ5JRC9 791 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 OLFML2BQ68BL8 750 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 CCDC84Q86UT8 332 aaPredicted RBP7.77□□□□□ -1.17
LINC00649-220ENST00000628906 ZNF280CQ8ND82 737 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 TSEN34Q9BSV6 310 aaKnown RBP7.77□□□□□ -1.17
LINC00649-220ENST00000628906 BABAM1Q9NWV8 329 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 FAM198AQ9UFP1 575 aa7.77□□□□□ -1.17
LINC00649-220ENST00000628906 LRRFIP2Q9Y608 721 aaKnown RBP7.77□□□□□ -1.17
LINC00649-220ENST00000628906 SPEF2Q9C093 1822 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 HELZ2Q9BYK8 2649 aaKnown RBP7.76□□□□□ -1.17
LINC00649-220ENST00000628906 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 ITGA6P23229 1130 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
LINC00649-220ENST00000628906 ZXDAP98168 799 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 NFIAQ12857 509 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 GRB14Q14449 540 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 MCTP2Q6DN12 878 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 RNF180Q86T96 592 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 ZFPM1Q8IX07 1006 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 MYD88Q99836 296 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 TBC1D2Q9BYX2 928 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 HYPKQ9NX55 129 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.76□□□□□ -1.17
LINC00649-220ENST00000628906 SMCHD1A6NHR9 2005 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 MROH7Q68CQ1 1323 aa7.76□□□□□ -1.17
LINC00649-220ENST00000628906 LOC285556D6RIA3 1793 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 SOBPA7XYQ1 873 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 APBB1O00213 710 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 HIBADHP31937 336 aaKnown RBP7.75□□□□□ -1.17
LINC00649-220ENST00000628906 CYP2C18P33260 490 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 FXR2P51116 673 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00649-220ENST00000628906 NFE2L2Q16236 605 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 FRMD5Q7Z6J6 570 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 PIP4P2Q8N4L2 257 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 GTF3C2Q8WUA4 911 aaPredicted RBP7.75□□□□□ -1.17
LINC00649-220ENST00000628906 TBC1D22AQ8WUA7 517 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 NUP133Q8WUM0 1156 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 VWCEQ96DN2 955 aa7.75□□□□□ -1.17
LINC00649-220ENST00000628906 FAM84BQ96KN1 310 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms