RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 KIAA1683Q9H0B3 1180 aa19.98■□□□□ 0.79
UBE3D-208ENST00000626828 EFCC1Q9HA90 598 aa19.98■□□□□ 0.79
UBE3D-208ENST00000626828 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
UBE3D-208ENST00000626828 TRIM17Q9Y577 477 aa19.98■□□□□ 0.79
UBE3D-208ENST00000626828 SLC3A2P08195 630 aaKnown RBP19.97■□□□□ 0.79
UBE3D-208ENST00000626828 AKR1B1P15121 316 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 MFAP1P55081 439 aaKnown RBP19.97■□□□□ 0.79
UBE3D-208ENST00000626828 ALX1Q15699 326 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 OTOP1Q7RTM1 612 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 ZNF444Q8N0Y2 327 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-208ENST00000626828 ACER1Q8TDN7 264 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 SMCR8Q8TEV9 937 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-208ENST00000626828 MYH8P13535 1937 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 ADGRA2Q96PE1 1338 aa19.97■□□□□ 0.79
UBE3D-208ENST00000626828 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 BCRP11274 1271 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 LACTBP83111 547 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-208ENST00000626828 TTC22Q5TAA0 569 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 FBXO46Q6PJ61 603 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-208ENST00000626828 C12orf42Q96LP6 360 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 ASCC2Q9H1I8 757 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-208ENST00000626828 KANSL2Q9H9L4 492 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 DIAPH3Q9NSV4 1193 aa19.96■□□□□ 0.79
UBE3D-208ENST00000626828 GNRH1P01148 92 aa19.95■□□□□ 0.78
UBE3D-208ENST00000626828 GCLCP48506 637 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-208ENST00000626828 PDE4BQ07343 736 aa19.95■□□□□ 0.78
UBE3D-208ENST00000626828 CENPQQ7L2Z9 268 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-208ENST00000626828 STK11IPQ8N1F8 1099 aa19.95■□□□□ 0.78
UBE3D-208ENST00000626828 ARHGEF10LQ9HCE6 1279 aa19.95■□□□□ 0.78
UBE3D-208ENST00000626828 NEFLP07196 543 aa19.94■□□□□ 0.78
UBE3D-208ENST00000626828 RASA1P20936 1047 aa19.94■□□□□ 0.78
UBE3D-208ENST00000626828 IRX3P78415 501 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-208ENST00000626828 PPARAQ07869 468 aa19.94■□□□□ 0.78
UBE3D-208ENST00000626828 ZYXQ15942 572 aaKnown RBP19.94■□□□□ 0.78
UBE3D-208ENST00000626828 P2RX7Q99572 595 aaKnown RBP19.94■□□□□ 0.78
UBE3D-208ENST00000626828 SH2D4AQ9H788 454 aa19.94■□□□□ 0.78
UBE3D-208ENST00000626828 ROBO3Q96MS0 1386 aa19.94■□□□□ 0.78
UBE3D-208ENST00000626828 A0A1W2PRG0 241 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L15C9J2P7 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L13C9JLJ4 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L11C9JVI0 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L18D6R9N7 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L22D6RA61 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L17D6RBQ6 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L19D6RCP7 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L20D6RJB6 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 FOXP2O15409 715 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 FGAP02671 866 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
UBE3D-208ENST00000626828 HOXD10P28358 340 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 PSMC4P43686 418 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 USP17L24Q0WX57 530 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 VPS53Q5VIR6 699 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
UBE3D-208ENST00000626828 SIAH1Q8IUQ4 282 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 PTPN22Q9Y2R2 807 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 CCDC171Q6TFL3 1326 aa19.93■□□□□ 0.78
UBE3D-208ENST00000626828 CENPBP07199 599 aaPredicted RBP19.92■□□□□ 0.78
UBE3D-208ENST00000626828 ICA1Q05084 483 aa19.92■□□□□ 0.78
UBE3D-208ENST00000626828 LOC285556D6RIA3 1793 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 CCDC85CA6NKD9 419 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 FMNL1O95466 1100 aaPredicted RBP19.91■□□□□ 0.78
UBE3D-208ENST00000626828 PRMT2P55345 433 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 CAP1Q01518 475 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 CATSPERGQ6ZRH7 1159 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 ZNF589Q86UQ0 364 aaPredicted RBP19.91■□□□□ 0.78
UBE3D-208ENST00000626828 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 GTF3C2Q8WUA4 911 aaPredicted RBP19.91■□□□□ 0.78
UBE3D-208ENST00000626828 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 HPS5Q9UPZ3 1129 aa19.91■□□□□ 0.78
UBE3D-208ENST00000626828 PRDM1O75626 825 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 CAPN15O75808 1086 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 EEF2P13639 858 aaKnown RBP19.9■□□□□ 0.78
UBE3D-208ENST00000626828 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
UBE3D-208ENST00000626828 ATP2B2Q01814 1243 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 FAM110CQ1W6H9 321 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.9■□□□□ 0.78
UBE3D-208ENST00000626828 ARHGAP39Q9C0H5 1083 aa19.9■□□□□ 0.78
UBE3D-208ENST00000626828 VCAM1P19320 739 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 FCGRTP55899 365 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 HERVK_113P62684 666 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 CTDSPL2Q05D32 466 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 NEDD1Q8NHV4 660 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 LPAR1Q92633 364 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 TRIM47Q96LD4 638 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 NYAP2Q9P242 653 aa19.89■□□□□ 0.77
UBE3D-208ENST00000626828 ZMYM6O95789 1325 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 TFAP4Q01664 338 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 RUFY2Q8WXA3 655 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 RPAP3Q9H6T3 665 aaPredicted RBP19.88■□□□□ 0.77
UBE3D-208ENST00000626828 VCPKMTQ9H867 229 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 MORF4L1Q9UBU8 362 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 SRRDQ9UH36 339 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 DOCK3Q8IZD9 2030 aa19.88■□□□□ 0.77
UBE3D-208ENST00000626828 ECM2O94769 699 aaPredicted RBP19.87■□□□□ 0.77
UBE3D-208ENST00000626828 FGRP09769 529 aa19.87■□□□□ 0.77
UBE3D-208ENST00000626828 TSPY3P0CV98 308 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms