RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ARHGAP39Q9C0H5 1083 aa26.78■■□□□ 1.88
SF1-220ENST00000626028 GREB1LQ9C091 1923 aaPredicted RBP26.77■■□□□ 1.88
SF1-220ENST00000626028 IRX3P78415 501 aaPredicted RBP26.77■■□□□ 1.88
SF1-220ENST00000626028 TRIM47Q96LD4 638 aa26.77■■□□□ 1.88
SF1-220ENST00000626028 OSBPL3Q9H4L5 887 aa26.77■■□□□ 1.88
SF1-220ENST00000626028 EMILIN3Q9NT22 766 aa26.77■■□□□ 1.88
SF1-220ENST00000626028 SRRDQ9UH36 339 aa26.77■■□□□ 1.88
SF1-220ENST00000626028 ROBO3Q96MS0 1386 aa26.76■■□□□ 1.87
SF1-220ENST00000626028 KIAA0100Q14667 2235 aaKnown RBP26.76■■□□□ 1.87
SF1-220ENST00000626028 PATL2C9JE40 543 aaKnown RBP26.76■■□□□ 1.87
SF1-220ENST00000626028 FMNL1O95466 1100 aaPredicted RBP26.76■■□□□ 1.87
SF1-220ENST00000626028 GUCY1A2P33402 732 aa26.76■■□□□ 1.87
SF1-220ENST00000626028 CDK8P49336 464 aa26.76■■□□□ 1.87
SF1-220ENST00000626028 NACAP1Q9BZK3 213 aa26.76■■□□□ 1.87
SF1-220ENST00000626028 ZNF287Q9HBT7 754 aa26.75■■□□□ 1.87
SF1-220ENST00000626028 M0R2C6 588 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 MPHOSPH10O00566 681 aaKnown RBP26.74■■□□□ 1.87
SF1-220ENST00000626028 CTGFP29279 349 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 EVX2Q03828 476 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 SEPT2Q15019 361 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 SLC9C1Q4G0N8 1177 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 ANKRD13CQ8N6S4 541 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 SLC44A5Q8NCS7 719 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 DYNLL2Q96FJ2 89 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 MORF4L1Q9UBU8 362 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 PTCH2Q9Y6C5 1203 aa26.74■■□□□ 1.87
SF1-220ENST00000626028 B4GALNT3Q6L9W6 998 aa26.73■■□□□ 1.87
SF1-220ENST00000626028 SH2D4AQ9H788 454 aa26.73■■□□□ 1.87
SF1-220ENST00000626028 CYP2D7A0A087X1C5 515 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L15C9J2P7 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L13C9JLJ4 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L11C9JVI0 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L18D6R9N7 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L22D6RA61 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L17D6RBQ6 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L19D6RCP7 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L20D6RJB6 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 APPP05067 770 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 TDO2P48775 406 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 HERVK_113P62684 666 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 USP17L24Q0WX57 530 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 ARHGEF10LQ9HCE6 1279 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 HELLSQ9NRZ9 838 aa26.72■■□□□ 1.87
SF1-220ENST00000626028 MYPNQ86TC9 1320 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 MYH4Q9Y623 1939 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 PLEKHM2Q8IWE5 1019 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 IFNL3Q8IZI9 196 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 ACER1Q8TDN7 264 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 LPAR1Q92633 364 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 KANSL2Q9H9L4 492 aa26.71■■□□□ 1.87
SF1-220ENST00000626028 EPB41L4AQ9HCS5 686 aaPredicted RBP26.71■■□□□ 1.87
SF1-220ENST00000626028 PARP14Q460N5 1801 aa26.7■■□□□ 1.87
SF1-220ENST00000626028 TNPO2O14787 897 aaKnown RBP26.7■■□□□ 1.86
SF1-220ENST00000626028 VCAM1P19320 739 aa26.7■■□□□ 1.86
SF1-220ENST00000626028 MLLT1Q03111 559 aaPredicted RBP26.7■■□□□ 1.86
SF1-220ENST00000626028 COA7Q96BR5 231 aa26.7■■□□□ 1.86
SF1-220ENST00000626028 ZNF333Q96JL9 665 aa26.7■■□□□ 1.86
SF1-220ENST00000626028 P2RX7Q99572 595 aaKnown RBP26.7■■□□□ 1.86
SF1-220ENST00000626028 RLFQ13129 1914 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 AKR1B1P15121 316 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 SOX10P56693 466 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 IRF5Q13568 498 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 LBX2Q6XYB7 198 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 RAET1EQ8TD07 263 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 SEC62Q99442 399 aaKnown RBP26.69■■□□□ 1.86
SF1-220ENST00000626028 TMX2Q9Y320 296 aa26.69■■□□□ 1.86
SF1-220ENST00000626028 ICA1Q05084 483 aa26.68■■□□□ 1.86
SF1-220ENST00000626028 CATSPERGQ6ZRH7 1159 aa26.68■■□□□ 1.86
SF1-220ENST00000626028 GPRC5AQ8NFJ5 357 aa26.68■■□□□ 1.86
SF1-220ENST00000626028 NAPBQ9H115 298 aa26.68■■□□□ 1.86
SF1-220ENST00000626028 MKNK2Q9HBH9 465 aa26.68■■□□□ 1.86
SF1-220ENST00000626028 A0A1W2PRG0 241 aa26.67■■□□□ 1.86
SF1-220ENST00000626028 MINDY4BA8MYZ0 360 aa26.67■■□□□ 1.86
SF1-220ENST00000626028 SLC3A2P08195 630 aaKnown RBP26.67■■□□□ 1.86
SF1-220ENST00000626028 ZYXQ15942 572 aaKnown RBP26.67■■□□□ 1.86
SF1-220ENST00000626028 TRIM6-TRIM34B2RNG4 842 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 SMIM22K7EJ46 135 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 PRKCZQ05513 592 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 SIAH1Q8IUQ4 282 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 SLAIN1Q8ND83 568 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 RABGAP1Q9Y3P9 1069 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 PLXNB2O15031 1838 aa26.66■■□□□ 1.86
SF1-220ENST00000626028 RASA1P20936 1047 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 GRK4P32298 578 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 PDE4BQ07343 736 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 MCMDC2Q4G0Z9 681 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 PXYLP1Q8TE99 480 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 RPAP3Q9H6T3 665 aaPredicted RBP26.65■■□□□ 1.86
SF1-220ENST00000626028 RBPJLQ9UBG7 517 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 TNRC18O15417 2968 aaPredicted RBP26.65■■□□□ 1.86
SF1-220ENST00000626028 A0A0G2JMZ2 1700 aa26.65■■□□□ 1.86
SF1-220ENST00000626028 MAPK4P31152 587 aa26.64■■□□□ 1.86
SF1-220ENST00000626028 TMEM106CQ9BVX2 250 aa26.64■■□□□ 1.86
SF1-220ENST00000626028 VCPKMTQ9H867 229 aa26.64■■□□□ 1.86
SF1-220ENST00000626028 HOXC10Q9NYD6 342 aa26.64■■□□□ 1.86
SF1-220ENST00000626028 SYNPO2Q9UMS6 1093 aa26.64■■□□□ 1.86
SF1-220ENST00000626028 FLT3LGP49771 235 aa26.63■■□□□ 1.85
SF1-220ENST00000626028 MFAP1P55081 439 aaKnown RBP26.63■■□□□ 1.85
SF1-220ENST00000626028 ERVK-9P63128 1117 aa26.63■■□□□ 1.85
SF1-220ENST00000626028 ERVK-24P63145 666 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms