RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 POLGP54098 1239 aaPredicted RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 TAF1CQ15572 869 aaPredicted RBP12.36□□□□□ -0.43
VPS8-227ENST00000625842 GANCQ8TET4 914 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 MEIS3Q99687 375 aa12.36□□□□□ -0.43
VPS8-227ENST00000625842 KDM6BO15054 1643 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 ALDH1A1P00352 501 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 HSPA1LP34931 641 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 LIG4P49917 911 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 PARK7Q99497 189 aaKnown RBP12.35□□□□□ -0.43
VPS8-227ENST00000625842 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 CEP170Q5SW79 1584 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 KCNA4P22459 653 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 TTC1Q99614 292 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 LRWD1Q9UFC0 647 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 DDX39AO00148 427 aaKnown RBP12.35□□□□□ -0.43
VPS8-227ENST00000625842 CCND2P30279 289 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 CACTINQ8WUQ7 758 aaKnown RBP12.35□□□□□ -0.43
VPS8-227ENST00000625842 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.35□□□□□ -0.43
VPS8-227ENST00000625842 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 V9GYY5 206 aaPredicted RBP12.35□□□□□ -0.43
VPS8-227ENST00000625842 MAPKBP1O60336 1514 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 RASA3Q14644 834 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
VPS8-227ENST00000625842 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 AKT3Q9Y243 479 aa12.35□□□□□ -0.43
VPS8-227ENST00000625842 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
VPS8-227ENST00000625842 KRT83P78385 493 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 Q6ZUG5 572 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 FNBP4Q8N3X1 1017 aaPredicted RBP12.34□□□□□ -0.43
VPS8-227ENST00000625842 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 UBXN4Q92575 508 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 INSRP06213 1382 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 BCRP11274 1271 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 AFMP43652 599 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 PDE1AP54750 535 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 VPS72Q15906 364 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 MRPS27Q92552 414 aaKnown RBP12.34□□□□□ -0.43
VPS8-227ENST00000625842 CEP63Q96MT8 703 aa12.34□□□□□ -0.43
VPS8-227ENST00000625842 NAP1L3Q99457 506 aaPredicted RBP12.34□□□□□ -0.43
VPS8-227ENST00000625842 PRDM5Q9NQX1 630 aaPredicted RBP12.34□□□□□ -0.43
VPS8-227ENST00000625842 TRAF5O00463 557 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 EXOC3O60645 756 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.43
VPS8-227ENST00000625842 TMEM191BP0C7N4 346 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 MAP7Q14244 749 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 AOC3Q16853 763 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 XKR9Q5GH70 373 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 DBNDD1Q9H9R9 158 aa12.33□□□□□ -0.43
VPS8-227ENST00000625842 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.43
VPS8-227ENST00000625842 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 TACC1O75410 805 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 GJC1P36383 396 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
VPS8-227ENST00000625842 DCUN1D2Q6PH85 259 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 MYCT1Q8N699 235 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 FAM167AQ96KS9 214 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 PSTPIP2Q9H939 334 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 A0A1W2PRG0 241 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 GPAA1O43292 621 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 TNNI1P19237 187 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 RAB11FIP4Q86YS3 637 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
VPS8-227ENST00000625842 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
VPS8-227ENST00000625842 E2F5Q15329 346 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
VPS8-227ENST00000625842 CEP112Q8N8E3 955 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
VPS8-227ENST00000625842 CCNT1O60563 726 aaKnown RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 ERCC5P28715 1186 aaPredicted RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 NNMTP40261 264 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 ASPRV1Q53RT3 343 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 SYNE4Q8N205 404 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 CALCRLQ16602 461 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 SPECC1LQ69YQ0 1117 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 SNX29Q8TEQ0 813 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 SDSP20132 328 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 CIITAP33076 1130 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 MMP14P50281 582 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 CHRNDQ07001 517 aa12.32□□□□□ -0.44
VPS8-227ENST00000625842 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
VPS8-227ENST00000625842 CLUL1Q15846 466 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms