RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TNNI2P48788 182 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 ATP8B2P98198 1209 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 HDLBPQ00341 1268 aaKnown RBP7.88□□□□□ -1.15
TCF4-249ENST00000625716 TFCP2Q12800 502 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 TNFAIP1Q13829 316 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 PRKG1Q13976 671 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 MVPQ14764 893 aaKnown RBP7.88□□□□□ -1.15
TCF4-249ENST00000625716 SUPT20HL1Q3ZLR7 823 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 ZBED3Q96IU2 234 aaPredicted RBP7.88□□□□□ -1.15
TCF4-249ENST00000625716 DEFB129Q9H1M3 183 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 TMOD2Q9NZR1 351 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 RCAN3Q9UKA8 241 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 DENND2AQ9ULE3 1009 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 SUGT1Q9Y2Z0 365 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 PPP2R3BQ9Y5P8 575 aa7.88□□□□□ -1.15
TCF4-249ENST00000625716 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 PNMA6EA0A0J9YXQ4 647 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 A0A1B0GUL7 405 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 UBE2Q2LH0YL09 131 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 FOXN1O15353 648 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 SURF6O75683 361 aaKnown RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 LDHBP07195 334 aaKnown RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 TIMM10P62072 90 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 CCDC102BQ68D86 513 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 CCDC116Q8IYX3 515 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 ZGPATQ8N5A5 531 aaKnown RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 PANK1Q8TE04 598 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 DDRGK1Q96HY6 314 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 MRIQ9BWK5 157 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 TDRD3Q9H7E2 651 aaKnown RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 C1orf115Q9H7X2 142 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 ZNF70Q9UC06 446 aaPredicted RBP7.87□□□□□ -1.15
TCF4-249ENST00000625716 PCDHAC2Q9Y5I4 1007 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 A0A1B0GUL6 1792 aa7.87□□□□□ -1.15
TCF4-249ENST00000625716 TCP10L2B9ZVM9 353 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 CA12O43570 354 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 VSIG8P0DPA2 414 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 RLBP1P12271 317 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 BMP2P12643 396 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 PHKA1P46020 1223 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 KIF23Q02241 960 aaPredicted RBP7.86□□□□□ -1.15
TCF4-249ENST00000625716 CBLBQ13191 982 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 RASA3Q14644 834 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 PPP1R26Q5T8A7 1209 aaPredicted RBP7.86□□□□□ -1.15
TCF4-249ENST00000625716 SPTY2D1Q68D10 685 aaPredicted RBP7.86□□□□□ -1.15
TCF4-249ENST00000625716 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 SSH3Q8TE77 659 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 XAGE2Q96GT9 111 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 ARHGAP9Q9BRR9 750 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 DNMT3LQ9UJW3 386 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 DDX19BQ9UMR2 479 aa7.86□□□□□ -1.15
TCF4-249ENST00000625716 ANGEL1Q9UNK9 670 aaKnown RBP7.86□□□□□ -1.15
TCF4-249ENST00000625716 COL1A1P02452 1464 aaPredicted RBP7.86□□□□□ -1.15
TCF4-249ENST00000625716 HMMRO75330 724 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 AP1G2O75843 785 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 UQCRFS1P1P0C7P4 283 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 ADORA1P30542 326 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 IREB2P48200 963 aaKnown RBP7.85□□□□□ -1.15
TCF4-249ENST00000625716 LBX1P52954 281 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 GRIK5Q16478 980 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 HSP90AB4PQ58FF6 505 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 CCDC158Q5M9N0 1113 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 TTC39AQ5SRH9 613 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 COL13A1Q5TAT6 717 aaPredicted RBP7.85□□□□□ -1.15
TCF4-249ENST00000625716 Q6ZVU0 165 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 MOB2Q70IA6 237 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 TNS4Q8IZW8 715 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 HOOK2Q96ED9 719 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 ZDHHC15Q96MV8 337 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 KCTD15Q96SI1 283 aaPredicted RBP7.85□□□□□ -1.15
TCF4-249ENST00000625716 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 ABCF2Q9UG63 623 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 COG6Q9Y2V7 657 aa7.85□□□□□ -1.15
TCF4-249ENST00000625716 SALL1Q9NSC2 1324 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
TCF4-249ENST00000625716 MAN1A2O60476 641 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 NBPF12Q5TAG4 269 aaPredicted RBP7.84□□□□□ -1.15
TCF4-249ENST00000625716 ERICH6Q7L0X2 663 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 DZIP1Q86YF9 867 aaKnown RBP7.84□□□□□ -1.15
TCF4-249ENST00000625716 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 ERC1Q8IUD2 1116 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 RPAP2Q8IXW5 612 aaPredicted RBP7.84□□□□□ -1.15
TCF4-249ENST00000625716 YTHDC1Q96MU7 727 aaKnown RBP7.84□□□□□ -1.15
TCF4-249ENST00000625716 GPR108Q9NPR9 543 aa7.84□□□□□ -1.15
TCF4-249ENST00000625716 PDS5AQ29RF7 1337 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 ZNF646O15015 1829 aaPredicted RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 POLR2AP24928 1970 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 UNCXA6NJT0 531 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 PPFIA3O75145 1194 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 LDHCP07864 332 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 HSPA8P11142 646 aaKnown RBP7.83□□□□□ -1.16
TCF4-249ENST00000625716 PRDX5P30044 214 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 CACNB3P54284 484 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 GSTO1P78417 241 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 SREBF2Q12772 1141 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
TCF4-249ENST00000625716 PDE3AQ14432 1141 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms