RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FUT2Q10981 343 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 NR1I3Q14994 352 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 WDR24Q96S15 920 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 KIF20AO95235 890 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 STX17P56962 302 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 GNG11P61952 73 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 ITPK1Q13572 414 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
VARS2-213ENST00000625423 ZNF771Q7L3S4 317 aaPredicted RBP12.84□□□□□ -0.35
VARS2-213ENST00000625423 CATIPQ7Z7H3 387 aa12.84□□□□□ -0.35
VARS2-213ENST00000625423 SYMPKQ92797 1274 aaKnown RBP12.84□□□□□ -0.35
VARS2-213ENST00000625423 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.35
VARS2-213ENST00000625423 TEX33O43247 280 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 PPP2R5BQ15173 497 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 NOL10Q9BSC4 688 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 PRPF3O43395 683 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 SLFN14P0C7P3 912 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 SIK1P57059 783 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 ZNF174Q15697 407 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 ST7Q9NRC1 585 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 TADA3O75528 432 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 CASQ1P31415 396 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 SMYD4Q8IYR2 804 aaPredicted RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
VARS2-213ENST00000625423 COL4A1P02462 1669 aa12.83□□□□□ -0.36
VARS2-213ENST00000625423 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 TOM1O60784 492 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 EVX2Q03828 476 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
VARS2-213ENST00000625423 MTF1Q14872 753 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 IQCA1Q86XH1 822 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 CCDC34Q96HJ3 373 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 COL1A1P02452 1464 aaPredicted RBP12.82□□□□□ -0.36
VARS2-213ENST00000625423 GOLGA6L9A6NEM1 432 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 TROAPQ12815 778 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 APTXQ7Z2E3 356 aaKnown RBP12.82□□□□□ -0.36
VARS2-213ENST00000625423 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 STAMQ92783 540 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
VARS2-213ENST00000625423 CUL4BQ13620 913 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 KARSQ15046 597 aaKnown RBP12.81□□□□□ -0.36
VARS2-213ENST00000625423 TERF2Q15554 542 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 SPATA1Q5VX52 437 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 ZNF384Q8TF68 577 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 NGLY1Q96IV0 654 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
VARS2-213ENST00000625423 SYNRGQ9UMZ2 1314 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 EFCAB8A8MWE9 144 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 AKR1B15C9JRZ8 316 aaPredicted RBP12.81□□□□□ -0.36
VARS2-213ENST00000625423 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 CPLX3Q8WVH0 158 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 USP17L21D6R901 530 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 DPYDQ12882 1025 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 NPY5RQ15761 445 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 FERMT2Q96AC1 680 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 C8orf37Q96NL8 207 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
VARS2-213ENST00000625423 NMT2O60551 498 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 COBLO75128 1261 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 RBL2Q08999 1139 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 UBE4AQ14139 1066 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 TTC38Q5R3I4 469 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 TNFRSF25Q93038 417 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 PNMA6AP0CW24 399 aaPredicted RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 PTGDRQ13258 359 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 DDB1Q16531 1140 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 KIFC2Q96AC6 838 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 MRPL44Q9H9J2 332 aaKnown RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 CALM1P0DP23 149 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 CALM2P0DP24 149 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 CALM3P0DP25 149 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 TMCO3Q6UWJ1 677 aa12.8□□□□□ -0.36
VARS2-213ENST00000625423 SRBD1Q8N5C6 995 aaKnown RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms