RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 NECAB1Q8N987 351 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
ATRX-213ENST00000624032 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
ATRX-213ENST00000624032 STK3Q13188 491 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 CAMK4Q16566 473 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 ME3Q16798 604 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.37□□□□□ -0.27
ATRX-213ENST00000624032 TTC6Q86TZ1 520 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 CCDC112Q8NEF3 446 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 CNOT7Q9UIV1 285 aaKnown RBP13.37□□□□□ -0.27
ATRX-213ENST00000624032 ELP1O95163 1332 aa13.37□□□□□ -0.27
ATRX-213ENST00000624032 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 RAB11FIP4Q86YS3 637 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 OSBPL5Q9H0X9 879 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 MYOZ2Q9NPC6 264 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 LIG1P18858 919 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 TBC1D10BQ4KMP7 808 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 KRT23Q9C075 422 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 ZNF70Q9UC06 446 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 DDX41Q9UJV9 622 aaKnown RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
ATRX-213ENST00000624032 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 ZNF75DP51815 510 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 AMOTL1Q8IY63 956 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
ATRX-213ENST00000624032 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
ATRX-213ENST00000624032 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
ATRX-213ENST00000624032 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
ATRX-213ENST00000624032 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
ATRX-213ENST00000624032 PLA2G4DQ86XP0 818 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
ATRX-213ENST00000624032 GOLGA6L4A6NEF3 574 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 WNT10BO00744 389 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
ATRX-213ENST00000624032 FGRP09769 529 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 IDI2Q9BXS1 227 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
ATRX-213ENST00000624032 NMT2O60551 498 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 RPS12P25398 132 aaKnown RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 ZNF280AP59817 542 aaPredicted RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 TPD52L1Q16890 204 aaPredicted RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 ZSCAN29Q8IWY8 852 aaPredicted RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 PDCP20941 246 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 CDK8P49336 464 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 PDE4BQ07343 736 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 ESR2Q92731 530 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 ZBED3Q96IU2 234 aaPredicted RBP13.34□□□□□ -0.27
ATRX-213ENST00000624032 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
ATRX-213ENST00000624032 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.27
ATRX-213ENST00000624032 IFIT3O14879 490 aaKnown RBP13.33□□□□□ -0.27
ATRX-213ENST00000624032 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.27
ATRX-213ENST00000624032 TMEM67Q5HYA8 995 aa13.33□□□□□ -0.27
ATRX-213ENST00000624032 DPF2Q92785 391 aa13.33□□□□□ -0.27
ATRX-213ENST00000624032 AGXT2Q9BYV1 514 aa13.33□□□□□ -0.27
ATRX-213ENST00000624032 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.27
ATRX-213ENST00000624032 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.27
ATRX-213ENST00000624032 ORC4O43929 436 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 EPS15P42566 896 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 GPC2Q8N158 579 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
ATRX-213ENST00000624032 TFAP4Q01664 338 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.28
ATRX-213ENST00000624032 KLF18A0A0U1RQI7 1052 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 RBM43Q6ZSC3 357 aaKnown RBP13.32□□□□□ -0.28
ATRX-213ENST00000624032 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
ATRX-213ENST00000624032 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 RXRAP19793 462 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 RASA1P20936 1047 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms